PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
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Home TFext BLAST Prediction Download Help About Links PlantRegMap |
Transcription Factor Information
Basic Information? help Back to Top | |||||||||
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TF ID | RWW15371.1 | ||||||||
Organism | |||||||||
Taxonomic ID | |||||||||
Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; commelinids; Zingiberales; Musaceae; Ensete
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Family | MYB_related | ||||||||
Protein Properties | Length: 336aa MW: 36669.7 Da PI: 5.0136 | ||||||||
Description | MYB_related family protein | ||||||||
Gene Model |
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Signature Domain? help Back to Top | |||||||
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No. | Domain | Score | E-value | Start | End | HMM Start | HMM End |
1 | Myb_DNA-binding | 49 | 1.4e-15 | 137 | 180 | 1 | 46 |
TSSS-HHHHHHHHHHHHHTTTT-HHHHHHHHTTTS-HHHHHHHHHH CS Myb_DNA-binding 1 rgrWTteEdellvdavkqlGggtWktIartmgkgRtlkqcksrwqk 46 rg ++++Ed+l++++++ G++ W+ Ia+ ++ gRt++++k++w++ RWW15371.1 137 RGTFSQQEDKLIIELHAAVGNR-WSQIAAQLP-GRTDNEIKNYWNS 180 899*******************.*********.***********96 PP |
Sequence ? help Back to Top |
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Protein Sequence Length: 336 aa Download sequence |
MRTADSVEEL QSSCVGDQSR SWTAPRCSSC PFRYAGNSKE KLLSSRRPHC CSRGHTFQGL 60 NPIAETASSG PVSSPVAAAN GEALLLLQAE AEERVVVSGG GREACEAHRQ VWPWLLELCP 120 QASRLRWINY LRPDLKRGTF SQQEDKLIIE LHAAVGNRWS QIAAQLPGRT DNEIKNYWNS 180 CIKKKLRQSG IDPSTHRPLS EVEGGEDKEA MASGRTSTSA PPPSHTIECA PLLQPNDDAN 240 DVVVPSSVSI SVPDLRCWEA GSSSNTSANS ANSSGEFELQ ISSSLFDSSI LQWLELFPSK 300 GAQFHFDGEP EDLKWSEYLN GTIGSDDGLL GEIKKE |
Best hit in Arabidopsis thaliana ? help Back to Top | ||||||
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Hit ID | E-value | Description | ||||
AT4G01680.3 | 9e-45 | MYB family protein |