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PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
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Home TFext BLAST Prediction Download Help About Links PlantRegMap |
Transcription Factor Information
Basic Information? help Back to Top | |||||||||
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TF ID | RWW13922.1 | ||||||||
Organism | |||||||||
Taxonomic ID | |||||||||
Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; commelinids; Zingiberales; Musaceae; Ensete
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Family | ERF | ||||||||
Protein Properties | Length: 217aa MW: 23335.9 Da PI: 7.7293 | ||||||||
Description | ERF family protein | ||||||||
Gene Model |
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Signature Domain? help Back to Top | |||||||
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No. | Domain | Score | E-value | Start | End | HMM Start | HMM End |
1 | AP2 | 57.5 | 3.3e-18 | 34 | 83 | 2 | 55 |
AP2 2 gykGVrwdkkrgrWvAeIrdpsengkr.krfslgkfgtaeeAakaaiaarkkleg 55 +y+GVr+++ +gr++AeIrdp + r +lg+f+tae+Aa a++ a+++++g RWW13922.1 34 RYRGVRRRP-WGRYAAEIRDPQ----SkERRWLGTFDTAEQAACAYDVAARAMRG 83 6********.**********93....35999**********************99 PP |
Sequence ? help Back to Top |
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Protein Sequence Length: 217 aa Download sequence |
MEEDHSSSSH GRNGNCSSTA GSGKRGRATK DGERYRGVRR RPWGRYAAEI RDPQSKERRW 60 LGTFDTAEQA ACAYDVAARA MRGPKARTNF YYPPATAARP RAAGPEVPHL NSPIDPLLLR 120 SLIDHSSSSL HHKPPCCPPC SSLSSCSPPP PPVTDHPTCG TAGLCGIASH PDSINASFTA 180 ASSSDQSLLV QFSSMAEVAD DCDFFRKEPP ESGLLQE |
Nucleic Localization Signal ? help Back to Top | |||
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No. | Start | End | Sequence |
1 | 24 | 42 | KRGRATKDGERYRGVRRRP |
Best hit in Arabidopsis thaliana ? help Back to Top | ||||||
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Hit ID | E-value | Description | ||||
AT1G24590.1 | 7e-23 | ERF family protein |