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PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
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Home TFext BLAST Prediction Download Help About Links PlantRegMap |
Transcription Factor Information
Basic Information? help Back to Top | |||||||||
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TF ID | RWW10904.1 | ||||||||
Organism | |||||||||
Taxonomic ID | |||||||||
Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; commelinids; Zingiberales; Musaceae; Ensete
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Family | ERF | ||||||||
Protein Properties | Length: 174aa MW: 18488.6 Da PI: 7.3515 | ||||||||
Description | ERF family protein | ||||||||
Gene Model |
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Signature Domain? help Back to Top | |||||||
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No. | Domain | Score | E-value | Start | End | HMM Start | HMM End |
1 | AP2 | 69.9 | 4.6e-22 | 51 | 101 | 2 | 56 |
AP2 2 gykGVrwdkkrgrWvAeIrdpsengkrkrfslgkfgtaeeAakaaiaarkklege 56 y+G+r+++ +g+W+AeIrdp++ +r++lg++gtaeeAa+a++ a+++++g+ RWW10904.1 51 SYRGIRRRP-WGKWAAEIRDPRK---GARVWLGTYGTAEEAARAYDVAALEIRGN 101 6********.**********954...4*************************985 PP |
Sequence ? help Back to Top |
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Protein Sequence Length: 174 aa Download sequence |
MCGGAIISDF VASVGGCDIM PDDELQTRHG EEGEATKTRA AGEGERRRKT SYRGIRRRPW 60 GKWAAEIRDP RKGARVWLGT YGTAEEAARA YDVAALEIRG NKAKLNFPDT AAAARGDTAA 120 VPPKKRRAGA AEAGTGEESS ASLDEGLRER ISSLETFLGL EHEEVGGGRG GCLG |
Nucleic Localization Signal ? help Back to Top | |||
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No. | Start | End | Sequence |
1 | 47 | 58 | RRKTSYRGIRRR |
Best hit in Arabidopsis thaliana ? help Back to Top | ||||||
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Hit ID | E-value | Description | ||||
AT2G47520.1 | 8e-28 | ERF family protein |