PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
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Home TFext BLAST Prediction Download Help About Links PlantRegMap |
Transcription Factor Information
Basic Information? help Back to Top | |||||||||
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TF ID | RWW07672.1 | ||||||||
Organism | |||||||||
Taxonomic ID | |||||||||
Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; commelinids; Zingiberales; Musaceae; Ensete
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Family | ERF | ||||||||
Protein Properties | Length: 393aa MW: 42400.7 Da PI: 8.4708 | ||||||||
Description | ERF family protein | ||||||||
Gene Model |
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Signature Domain? help Back to Top | |||||||
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No. | Domain | Score | E-value | Start | End | HMM Start | HMM End |
1 | AP2 | 65.2 | 1.3e-20 | 203 | 252 | 2 | 55 |
AP2 2 gykGVrwdkkrgrWvAeIrdpsengkrkrfslgkfgtaeeAakaaiaarkkleg 55 y+GVr+++ +g+WvAeIr p++ r+r +lg+f+taeeAa a+++a+ kl+g RWW07672.1 203 LYRGVRQRH-WGKWVAEIRLPKN---RTRLWLGTFDTAEEAALAYDKAAYKLRG 252 59******9.**********965...5*************************98 PP |
Sequence ? help Back to Top |
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Protein Sequence Length: 393 aa Download sequence |
MYNRYPFTTA DPFDEELMKA LEPFMTSASA SSLSHPPPPP PLPPPSSTSS TTSVTYSSPS 60 LTSTLPPSTF SSSPRFSIPS SIQNPNLGCY SLQNPTFGGY LCQDPALDAC SPSPSVAGLV 120 PESFSSLARL GVGSVGPVGL THLGPAQIQQ IQAQFLFQQR QSLLAARQLQ ASRHHHQAAS 180 FLGLRPQLMK HTGSPFAPKP TKLYRGVRQR HWGKWVAEIR LPKNRTRLWL GTFDTAEEAA 240 LAYDKAAYKL RGDFARLNFP NLRHAAGAAP GPLLSTVDAK LQALCQSLAN SSKSKKRSSP 300 LPSSTLKPIT ESATIGSADP PPTVTKEAAP KAGSEDNKSR SSSEGEDSSC SPPALEMQHL 360 DFTEAPWDES ETFMLQKHPS WEIDWDSILS SSS |
Best hit in Arabidopsis thaliana ? help Back to Top | ||||||
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Hit ID | E-value | Description | ||||
AT1G78080.1 | 6e-42 | ERF family protein |