PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
|
Home TFext BLAST Prediction Download Help About Links PlantRegMap |
Transcription Factor Information
Basic Information? help Back to Top | |||||||||
---|---|---|---|---|---|---|---|---|---|
TF ID | RWW04861.1 | ||||||||
Organism | |||||||||
Taxonomic ID | |||||||||
Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; commelinids; Zingiberales; Musaceae; Ensete
|
||||||||
Family | ERF | ||||||||
Protein Properties | Length: 250aa MW: 27980.2 Da PI: 6.8 | ||||||||
Description | ERF family protein | ||||||||
Gene Model |
|
Signature Domain? help Back to Top | |||||||
---|---|---|---|---|---|---|---|
No. | Domain | Score | E-value | Start | End | HMM Start | HMM End |
1 | AP2 | 65.6 | 9.7e-21 | 82 | 131 | 3 | 56 |
AP2 3 ykGVrwdkkrgrWvAeIrdpsengkrkrfslgkfgtaeeAakaaiaarkklege 56 ++GVr+++ +g+WvAeIr p++ r+r +lg+f+taeeAa a+++a+ +l+ge RWW04861.1 82 FRGVRQRH-WGKWVAEIRLPRN---RTRLWLGTFDTAEEAALAYDRAAFELRGE 131 8******9.**********955...5**************************97 PP |
Sequence ? help Back to Top |
---|
Protein Sequence Length: 250 aa Download sequence |
MLPQHLLNQK DDFLGCSSSV GFSYLFPAHI QQIRAQLQYQ QQLMSAASER RNLGNADPLA 60 ARRRPMKRAG SAPSPPKPTK LFRGVRQRHW GKWVAEIRLP RNRTRLWLGT FDTAEEAALA 120 YDRAAFELRG EAARLNFPEL RRNGSHMGPP LHSSVDAKLQ TICDTMANSQ KPKSALTGSA 180 TTEEPGTSSE EFKSESSSSL EEDEPSSGSS AVSAMQHLDF TEAPWDESEN FVLRKYPSWE 240 IDWDSILSSD |
Best hit in Arabidopsis thaliana ? help Back to Top | ||||||
---|---|---|---|---|---|---|
Hit ID | E-value | Description | ||||
AT1G78080.1 | 1e-49 | ERF family protein |