PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

RWW02995.1

Organism

Ensete ventricosum

Taxonomic ID

4639

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; commelinids; Zingiberales; Musaceae; Ensete

Family

FAR1

Protein Properties

Length: 446aa MW: 49523.3 Da PI: 6.8322

Description

FAR1 family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
RWW02995.1	genome	NCBI	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	FAR1	59.8	8.7e-19	196	280	2	91
FAR1 2 fYneYAkevGFsvrkskskkskrngeitkrtfvCskegkreeekkktekerrtraetrtgCkaklkvkkekdgkwevtkleleHnHelap 91 fY++YA +vGF v+++ks+ + + g + + +vCskegk++++ +++r++ +t+C+a + k++ dg +v + +leHnHel+p RWW02995.1 196 FYKRYAMRVGFGVTIKKSSFT-TYGLCRRLVLVCSKEGKAQTKACY----HQSRPSMKTNCEAAFIAKLWGDGLLHVVEAKLEHNHELNP 280 ***************9998.7888************9999....999********************************975 PP

Sequence ? help Back to Top
Protein Sequence Length: 446 aa Download sequence
MISQVPTQLG EKHGCSTLGA TTALPPFPLR RLSFSLRRTL NPFPLPIPLL DRGRVDRRRP 60 GTIAPPRPFS LIRGSVFFAP PFSTVLGFGI PFFTHDLGGE IILKDGANFI DERHDEDGAN 120 DSAMGENEAS QVGKNWSDTV DEGKIDQTKE LVIHDEDDSV GKMDKAELDV QGVTGGDDGI 180 PRVGMVFNSY GEAVTFYKRY AMRVGFGVTI KKSSFTTYGL CRRLVLVCSK EGKAQTKACY 240 HQSRPSMKTN CEAAFIAKLW GDGLLHVVEA KLEHNHELNP SEAHLYRCYK NMSSGATKDL 300 AVRAAGLPSQ YILNRWRKDF KLLYALECSS KDAYGNKHIE QYDSLSKHCL RLVEIGMVSD 360 EKYQLALKLV REVERSLLDE NIFQDLHSRL VSSVTRLTGS DENHAASQVG IVDGDKTPSS 420 VWFLALGEFK CQWGMSVVIL GNEADE

Sequence ? help Back to Top

Protein Sequence Length: 446 aa Download sequence

MISQVPTQLG EKHGCSTLGA TTALPPFPLR RLSFSLRRTL NPFPLPIPLL DRGRVDRRRP  60
GTIAPPRPFS LIRGSVFFAP PFSTVLGFGI PFFTHDLGGE IILKDGANFI DERHDEDGAN  120
DSAMGENEAS QVGKNWSDTV DEGKIDQTKE LVIHDEDDSV GKMDKAELDV QGVTGGDDGI  180
PRVGMVFNSY GEAVTFYKRY AMRVGFGVTI KKSSFTTYGL CRRLVLVCSK EGKAQTKACY  240
HQSRPSMKTN CEAAFIAKLW GDGLLHVVEA KLEHNHELNP SEAHLYRCYK NMSSGATKDL  300
AVRAAGLPSQ YILNRWRKDF KLLYALECSS KDAYGNKHIE QYDSLSKHCL RLVEIGMVSD  360
EKYQLALKLV REVERSLLDE NIFQDLHSRL VSSVTRLTGS DENHAASQVG IVDGDKTPSS  420
VWFLALGEFK CQWGMSVVIL GNEADE

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT1G80010.1	3e-10	FAR1 family protein