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PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
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Home TFext BLAST Prediction Download Help About Links PlantRegMap |
Transcription Factor Information
Basic Information? help Back to Top | |||||||||
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TF ID | RWV87954.1 | ||||||||
Organism | |||||||||
Taxonomic ID | |||||||||
Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; commelinids; Zingiberales; Musaceae; Ensete
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Family | ERF | ||||||||
Protein Properties | Length: 215aa MW: 24149.2 Da PI: 6.5646 | ||||||||
Description | ERF family protein | ||||||||
Gene Model |
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Signature Domain? help Back to Top | |||||||
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No. | Domain | Score | E-value | Start | End | HMM Start | HMM End |
1 | AP2 | 66.4 | 5.6e-21 | 84 | 133 | 2 | 55 |
AP2 2 gykGVrwdkkrgrWvAeIrdpsengkrkrfslgkfgtaeeAakaaiaarkkleg 55 g++GVr+++ +grW+AeIrdp++ rkr +lg+f+taeeAa ++ a+++l+g RWV87954.1 84 GFRGVRRRP-WGRWAAEIRDPYQ---RKRLWLGTFDTAEEAATVYDMAALRLKG 133 89*******.**********876...5*************************98 PP |
Sequence ? help Back to Top |
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Protein Sequence Length: 215 aa Download sequence |
MMDPAGAACG IKLKKAVAGG SGHRSRIVRV YFDDADATES SSGEEEPGAR RRVKRYVHEF 60 KIEMARAPRR RPAEVEGGER GKRGFRGVRR RPWGRWAAEI RDPYQRKRLW LGTFDTAEEA 120 ATVYDMAALR LKGAKAVTNF PSSKAVGEEE ECASPTSVLR FGDDREAPFD YTFDGGMEAL 180 VLGEDASPLF MAEFYWPRPR LLEVEFGDLD ANDFF |
Best hit in Arabidopsis thaliana ? help Back to Top | ||||||
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Hit ID | E-value | Description | ||||
AT4G27950.1 | 7e-24 | ERF family protein |