PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
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Home TFext BLAST Prediction Download Help About Links PlantRegMap |
Transcription Factor Information
Basic Information? help Back to Top | |||||||||
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TF ID | RWV78769.1 | ||||||||
Organism | |||||||||
Taxonomic ID | |||||||||
Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; commelinids; Zingiberales; Musaceae; Ensete
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Family | MYB_related | ||||||||
Protein Properties | Length: 240aa MW: 27142.2 Da PI: 4.6378 | ||||||||
Description | MYB_related family protein | ||||||||
Gene Model |
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Signature Domain? help Back to Top | |||||||
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No. | Domain | Score | E-value | Start | End | HMM Start | HMM End |
1 | Myb_DNA-binding | 26.9 | 1.1e-08 | 16 | 53 | 1 | 45 |
TSSS-HHHHHHHHHHHHHTTTT.-HHHHHHHHTTTS-HHHHHHHHH CS Myb_DNA-binding 1 rgrWTteEdellvdavkqlGgg.tWktIartmgkgRtlkqcksrwq 45 +g+W++eEd +l+ +++++G+g +W + ++++g +rw+ RWV78769.1 16 KGPWSPEEDAILKAYIEEHGTGgNWIALPHKIG--------ELRWL 53 79************************9999999........34444 PP |
Sequence ? help Back to Top |
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Protein Sequence Length: 240 aa Download sequence |
REMGRAPCCD KGNVKKGPWS PEEDAILKAY IEEHGTGGNW IALPHKIGEL RWLNYLRPNI 60 KHGDFSEEED LIILTSSALE RIQLHMQLQS VYNPFSFYHN PAQWPDHHAL GESNFQSHNM 120 DDMAKAQALG DMAAYQPKFD MHNTTIQEEM DCSTLGFRSP PDSLGAPSTD RSRSSSNPLE 180 PANGCKLYGS CDYKQTNVEV EIMDSWDCNG LSEDTSGLWD LTAVIHADSM LQEYMRERQC |
Best hit in Arabidopsis thaliana ? help Back to Top | ||||||
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Hit ID | E-value | Description | ||||
AT5G57620.1 | 5e-38 | MYB family protein |