PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

RWR95692.1

Organism

Cinnamomum micranthum f. kanehirae

Taxonomic ID

337451

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Magnoliidae; Laurales; Lauraceae; Cinnamomum; Cinnamomum micranthum

Family

bZIP

Protein Properties

Length: 420aa MW: 44264.6 Da PI: 6.5925

Description

bZIP family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
RWR95692.1	genome	NCBI	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	bZIP_1	76.4	3.6e-24	290	352	1	63
XXXXCHHHCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH CS bZIP_1 1 ekelkrerrkqkNReAArrsRqRKkaeieeLeekvkeLeaeNkaLkkeleelkkevaklksev 63 e+elkr+rrkq+NRe+ArrsR+RK+ae+eeL+ kv++L +eN++L++el++l +e++kl+se+ RWR95692.1 290 ERELKRQRRKQSNRESARRSRLRKQAECEELAGKVETLNNENRSLRSELQRLAEECQKLTSEN 352 89***********************************************************98 PP

Sequence ? help Back to Top
Protein Sequence Length: 420 aa Download sequence
MGSGEENTPS KPTKPATATQ ELPTTPSYPD WASPMQTYYG AGASTPPPFF PSTVASSPPP 60 HPYLWGGQHL MPPYGTPLPY PAMYPHGGIY GHPPMAAAQG MIMTATETEG KSSDVKDKGL 120 VKSKGSSGNT GLASGKSGDG GKAASGSAND GASQSGESGS EGSSDASDEN NNHQEFSAAR 180 KKSFDQMIAD GANAQHNNTV HYSGSALESS FSARGQPAAK LPITVPGKPA VSVPTTNLNI 240 GMDLWNNTAP VGSVPIKARP NAPGVSQAIV PGPMVGREGV MPEHQWMQDE RELKRQRRKQ 300 SNRESARRSR LRKQAECEEL AGKVETLNNE NRSLRSELQR LAEECQKLTS ENASIVEQLN 360 QLYEHDAVSS VEVNDANTSG FQSADEGMGH VLNASRGSSS VSGPNGKFFS SNGKHESGSN

Sequence ? help Back to Top

Protein Sequence Length: 420 aa Download sequence

MGSGEENTPS KPTKPATATQ ELPTTPSYPD WASPMQTYYG AGASTPPPFF PSTVASSPPP  60
HPYLWGGQHL MPPYGTPLPY PAMYPHGGIY GHPPMAAAQG MIMTATETEG KSSDVKDKGL  120
VKSKGSSGNT GLASGKSGDG GKAASGSAND GASQSGESGS EGSSDASDEN NNHQEFSAAR  180
KKSFDQMIAD GANAQHNNTV HYSGSALESS FSARGQPAAK LPITVPGKPA VSVPTTNLNI  240
GMDLWNNTAP VGSVPIKARP NAPGVSQAIV PGPMVGREGV MPEHQWMQDE RELKRQRRKQ  300
SNRESARRSR LRKQAECEEL AGKVETLNNE NRSLRSELQR LAEECQKLTS ENASIVEQLN  360
QLYEHDAVSS VEVNDANTSG FQSADEGMGH VLNASRGSSS VSGPNGKFFS SNGKHESGSN

Nucleic Localization Signal ? help Back to Top

No.	Start	End	Sequence
1	307	313	RRSRLRK
2	307	314	RRSRLRKQ

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT4G36730.1	1e-74	bZIP family protein