PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
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Transcription Factor Information
Basic Information? help Back to Top | |||||||||
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TF ID | RWR94482.1 | ||||||||
Organism | |||||||||
Taxonomic ID | |||||||||
Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Magnoliidae; Laurales; Lauraceae; Cinnamomum; Cinnamomum micranthum
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Family | MYB | ||||||||
Protein Properties | Length: 454aa MW: 50851.6 Da PI: 7.786 | ||||||||
Description | MYB family protein | ||||||||
Gene Model |
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Signature Domain? help Back to Top | |||||||
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No. | Domain | Score | E-value | Start | End | HMM Start | HMM End |
1 | Myb_DNA-binding | 53.4 | 5.8e-17 | 14 | 61 | 1 | 48 |
TSSS-HHHHHHHHHHHHHTTTT-HHHHHHHHTTTS-HHHHHHHHHHHT CS Myb_DNA-binding 1 rgrWTteEdellvdavkqlGggtWktIartmgkgRtlkqcksrwqkyl 48 +g W++eEde+l + ++++G g+W+++++ g+ R++k+c++rw +yl RWR94482.1 14 KGLWSPEEDEKLRRHITKYGHGCWSSVPKQAGLQRCGKSCRLRWINYL 61 678*******************************************97 PP | |||||||
2 | Myb_DNA-binding | 46.9 | 6.4e-15 | 67 | 110 | 1 | 46 |
TSSS-HHHHHHHHHHHHHTTTT-HHHHHHHHTTTS-HHHHHHHHHH CS Myb_DNA-binding 1 rgrWTteEdellvdavkqlGggtWktIartmgkgRtlkqcksrwqk 46 rg +++eE+ l++++++ lG++ W+ Ia+ ++ gRt++++k+ w++ RWR94482.1 67 RGTFSQEEENLIIELHTVLGNR-WSQIAAQLP-GRTDNEIKNLWNS 110 899*******************.*********.*********9986 PP |
Sequence ? help Back to Top |
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Protein Sequence Length: 454 aa Download sequence |
MGRHSCCYKQ KLRKGLWSPE EDEKLRRHIT KYGHGCWSSV PKQAGLQRCG KSCRLRWINY 60 LRPDLKRGTF SQEEENLIIE LHTVLGNRWS QIAAQLPGRT DNEIKNLWNS CIKKKLRQSG 120 IDPNTHKLLS EVEDGEDNPH SNTDRESKSS ELKLLTATTM TEDSKPGLSE QKPQLITAKP 180 YTIDGLNSNI NTTSRNPITP TKEFFIERFA TSHESSTRNR PSDSMGYFPL QHLNSSPNCS 240 NQIATAVASV NANPVLSFNQ NCEPFGMNSQ FNSSSISSVL PSLPSLVLAN SMDFKPVISL 300 APDNNSIGGT NIMRGVQSWG AGTTSNSSNS RSSSSIELQG NSSFFDNHLF SWGLADCRVE 360 SQDLSSEKAA QIHLEGEPED VKWSQLLHHP FSMTSRIPNQ NQNQNLFSEI KSDSQFATIS 420 NSLTTWHQAQ QQQLQASDVY RKEYPRIAAA FEQI |
Best hit in Arabidopsis thaliana ? help Back to Top | ||||||
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Hit ID | E-value | Description | ||||
AT4G01680.3 | 7e-91 | MYB family protein |