PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
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Home TFext BLAST Prediction Download Help About Links PlantRegMap |
Transcription Factor Information
Basic Information? help Back to Top | |||||||||
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TF ID | RWR92558.1 | ||||||||
Organism | |||||||||
Taxonomic ID | |||||||||
Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Magnoliidae; Laurales; Lauraceae; Cinnamomum; Cinnamomum micranthum
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Family | ERF | ||||||||
Protein Properties | Length: 219aa MW: 24724.3 Da PI: 10.6087 | ||||||||
Description | ERF family protein | ||||||||
Gene Model |
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Signature Domain? help Back to Top | |||||||
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No. | Domain | Score | E-value | Start | End | HMM Start | HMM End |
1 | AP2 | 66.6 | 4.9e-21 | 135 | 185 | 1 | 55 |
AP2 1 sgykGVrwdkkrgrWvAeIrdpsengkr.krfslgkfgtaeeAakaaiaarkkleg 55 ++y+GVr+++ +g+W+AeIrdp+ r +r++lg+f+taeeAa+a+++a+ ++g RWR92558.1 135 KKYRGVRQRP-WGKWAAEIRDPR----RaARVWLGTFDTAEEAARAYDKAAIDFRG 185 59********.**********82....48**********************99887 PP |
Sequence ? help Back to Top |
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Protein Sequence Length: 219 aa Download sequence |
MFRKQAMTEV SAQLQRPAKR TKRQQQQQHQ QVVVIEDDEG TKTQNQRIPG CRLTREQEMS 60 VMVSALKRVI SGETGTGFPI PSSFEFATSS SFSPAICIGQ SPVESLETCE SCRIEGCLGC 120 QFFGTQVQAE KPKKKKYRGV RQRPWGKWAA EIRDPRRAAR VWLGTFDTAE EAARAYDKAA 180 IDFRGARAKL NFPFLNSHCK MIKSSSSSSS CKRRIRIPQ |
Best hit in Arabidopsis thaliana ? help Back to Top | ||||||
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Hit ID | E-value | Description | ||||
AT4G34410.1 | 1e-33 | ERF family protein |