PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
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Home TFext BLAST Prediction Download Help About Links PlantRegMap |
Transcription Factor Information
Basic Information? help Back to Top | |||||||||
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TF ID | RWR90070.1 | ||||||||
Organism | |||||||||
Taxonomic ID | |||||||||
Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Magnoliidae; Laurales; Lauraceae; Cinnamomum; Cinnamomum micranthum
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Family | ERF | ||||||||
Protein Properties | Length: 243aa MW: 26997.8 Da PI: 4.7632 | ||||||||
Description | ERF family protein | ||||||||
Gene Model |
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Signature Domain? help Back to Top | |||||||
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No. | Domain | Score | E-value | Start | End | HMM Start | HMM End |
1 | AP2 | 56 | 1e-17 | 99 | 148 | 1 | 55 |
AP2 1 sgykGVrwdkkrgrWvAeIrdpsengkr.krfslgkfgtaeeAakaaiaarkkleg 55 ++y+GVr++ g+WvAeI+dp r +r++lg+f taeeAa+a+++ + +++g RWR90070.1 99 PKYRGVRQR--LGKWVAEIHDPE----RrRRVWLGTFETAEEAARAYDERAIEFHG 148 79****975..7*********62....34********************9999998 PP |
Sequence ? help Back to Top |
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Protein Sequence Length: 243 aa Download sequence |
MKPIVREDGE PSRAFLSSGL TREEENSIIL STYKHLLFND VVDHSSPYEQ TLPFQGSGDA 60 APSTPSDGSP ILLNVSESPC SSCGQGIEGC LGCNLFSPPK YRGVRQRLGK WVAEIHDPER 120 RRRVWLGTFE TAEEAARAYD ERAIEFHGAR ARLNFPSFEY SPPPDHTLLE GEQEQQQPST 180 SHPTSLNWEA PPEVTFEGNM LEALGGEEFR NWVKIGNNEY ALAALSSAST GEKHGDHIVE 240 RRT |
Best hit in Arabidopsis thaliana ? help Back to Top | ||||||
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Hit ID | E-value | Description | ||||
AT4G34410.1 | 5e-16 | ERF family protein |