PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID RWR89888.1
Organism
Cinnamomum micranthum f. kanehirae
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Magnoliidae; Laurales; Lauraceae; Cinnamomum; Cinnamomum micranthum
Family ERF
Protein Properties Length: 335aa    MW: 37072.5 Da    PI: 6.5966
Description ERF family protein
Gene Model
Gene Model ID Type Source Coding Sequence
RWR89888.1genomeNCBIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1AP267.52.5e-21175225256
         AP2   2 gykGVrwdkkrgrWvAeIrdpsengkrkrfslgkfgtaeeAakaaiaarkklege 56 
                  y+GVr+++ +g+WvAeIr p++   r+r +lg+f+taeeAa a+++a+ kl+ge
  RWR89888.1 175 LYRGVRQRH-WGKWVAEIRLPKN---RTRLWLGTFDTAEEAALAYDQAAYKLRGE 225
                 59******9.**********965...5**************************97 PP
Sequence ? help Back to Top
Protein Sequence    Length: 335 aa     Download sequence    
MATAVDCLTI NSPVFSDPSI EDLLKALEPF IKGASISSTP SFFCPSSPLP PLPPSYSFSP  60
YSPSLSSYTD IPLDFCSTST PHMDFQGFST YDHLGLDQSG SIGLNQLNPS QIQQIQAEFQ  120
LQQQQQQQQY QMAMAAASPS LLTQKQSFHQ HNMKFLGPRA VPMKQIGLPS KPTKLYRGVR  180
QRHWGKWVAE IRLPKNRTRL WLGTFDTAEE AALAYDQAAY KLRGELARLN FPHLRHQGSN  240
IGCGNLGDYF RPLHSSVDAK LQAICQSLPN SQKQGNPTKP SSSSSSNQPS LVSHSDESAG  300
SSPSSENKFP DFTEAPWDDS EKFPLLDIDW DAVTF
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT1G78080.17e-49ERF family protein