PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

RWR87426.1

Organism

Cinnamomum micranthum f. kanehirae

Taxonomic ID

337451

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Magnoliidae; Laurales; Lauraceae; Cinnamomum; Cinnamomum micranthum

Family

ERF

Protein Properties

Length: 545aa MW: 59877.8 Da PI: 8.393

Description

ERF family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
RWR87426.1	genome	NCBI	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	AP2	62	1.3e-19	388	438	2	55
AP2 2 gykGVrwdkkrgrWvAeIrdpsengkrkrfslgkfgtaeeAakaaiaarkkleg 55 +y+GVr+++ +g+++AeIrdp+++g r++lg+f ta eAaka+++a+ +++g RWR87426.1 388 HYRGVRQRP-WGKFAAEIRDPNKRG--SRVWLGTFETAIEAAKAYDRAAFQMRG 438 8******.******96655..***********************98 PP

Sequence ? help Back to Top
Protein Sequence Length: 545 aa Download sequence
MITLKSNTLD STSHFVERSA RVEMARWSGV LTVSLNPSSK TPLFKIAASL CLSPSSKTLA 60 VPSANAIFFS GDRVKGTGNP VIERLSDSRN IAEILVSKLG ASVNAWVVEA SVFNGPFAVY 120 KEFIPSVNSW GEPRSYDPNG FPASSSTFLL ISKCLEEAKN MIHGEKQEPS HISTHLMPSV 180 SCSPSTKTIV IGFSKGGTVL NQLITEVAHA KVETQGVHEE NHIFPTSKET FLSSISDFHY 240 VDVGLNSSGA YLIDEFVIKK ISENLSQHNT NGISFTLHGT PRQWCDSRRP WIRNEKERLK 300 QLLEDEACRS GGKLQIDGSD GDFFESRAPT VQKVADLKEK SNLCHLKRSD SASPRRPSLK 360 ISLPPAPRIE WSDRTEAPAA EASGEKKHYR GVRQRPWGKF AAEIRDPNKR GSRVWLGTFE 420 TAIEAAKAYD RAAFQMRGSK AILNFPLEAG KSKEPSTAGQ KRRRETESEQ AAVAVAVAVT 480 DEEENPVKKE RTTMESSEVE YAANIPLTPS CWTCVDMTGT GIFNVPPLSP LSPHPAFGFL 540 QLMVI

Sequence ? help Back to Top

Protein Sequence Length: 545 aa Download sequence

MITLKSNTLD STSHFVERSA RVEMARWSGV LTVSLNPSSK TPLFKIAASL CLSPSSKTLA  60
VPSANAIFFS GDRVKGTGNP VIERLSDSRN IAEILVSKLG ASVNAWVVEA SVFNGPFAVY  120
KEFIPSVNSW GEPRSYDPNG FPASSSTFLL ISKCLEEAKN MIHGEKQEPS HISTHLMPSV  180
SCSPSTKTIV IGFSKGGTVL NQLITEVAHA KVETQGVHEE NHIFPTSKET FLSSISDFHY  240
VDVGLNSSGA YLIDEFVIKK ISENLSQHNT NGISFTLHGT PRQWCDSRRP WIRNEKERLK  300
QLLEDEACRS GGKLQIDGSD GDFFESRAPT VQKVADLKEK SNLCHLKRSD SASPRRPSLK  360
ISLPPAPRIE WSDRTEAPAA EASGEKKHYR GVRQRPWGKF AAEIRDPNKR GSRVWLGTFE  420
TAIEAAKAYD RAAFQMRGSK AILNFPLEAG KSKEPSTAGQ KRRRETESEQ AAVAVAVAVT  480
DEEENPVKKE RTTMESSEVE YAANIPLTPS CWTCVDMTGT GIFNVPPLSP LSPHPAFGFL  540
QLMVI

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT5G47230.1	3e-55	ERF family protein