PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID RWR85386.1
Organism
Cinnamomum micranthum f. kanehirae
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Magnoliidae; Laurales; Lauraceae; Cinnamomum; Cinnamomum micranthum
Family ERF
Protein Properties Length: 393aa    MW: 43331 Da    PI: 6.8051
Description ERF family protein
Gene Model
Gene Model ID Type Source Coding Sequence
RWR85386.1genomeNCBIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1AP256.28.3e-18243293255
         AP2   2 gykGVrwdkkrgrWvAeIrdpsengkrkrfslgkfgtaeeAakaaiaarkkleg 55 
                 +y+GVr+++ +g+++AeIrd +++g   r++lg+f t  eAaka+++a+ +++g
  RWR85386.1 243 HYRGVRQRP-WGKFAAEIRDSNKRG--SRVWLGTFETGIEAAKAYDRAAFQMRG 293
                 8********.**********53443..*************************98 PP
Sequence ? help Back to Top
Protein Sequence    Length: 393 aa     Download sequence    
MGPTTFEKLA PSGNLLETPL DYRRKQQRHT TLPPPIFLEA LLSPLLSPHS LLLINPSPST  60
RHDFKLPSIP LSSISTYFLF HFHLLSFLLL LMATADEVSA LDLIRQHLID DFDFSSFEND  120
KNLISSSEVD PKLSVLVRKA ETFDSETQSC SSTSFGSPNY IPKQEDLSDY LHLNESDGDF  180
LEFRAIPAQR VADLKEKSNL CQQRRPGSAA STRRPSLKIA LPPVPKVELS DAPAAEVSGE  240
KKHYRGVRQR PWGKFAAEIR DSNKRGSRVW LGTFETGIEA AKAYDRAAFQ MRGSRAILNF  300
PLEAGNGEEQ STAGRKRRPE AESDEQAAAA AAKPTKKERS TEEAAAAEYA GNIPLTPSSW  360
TGVDLSGMGI FNVPPLSPLS PHPAMGYLQL MVT
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT5G47230.13e-51ERF family protein