PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
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Home TFext BLAST Prediction Download Help About Links PlantRegMap |
Transcription Factor Information
Basic Information? help Back to Top | |||||||||
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TF ID | RWR84496.1 | ||||||||
Organism | |||||||||
Taxonomic ID | |||||||||
Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Magnoliidae; Laurales; Lauraceae; Cinnamomum; Cinnamomum micranthum
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Family | WOX | ||||||||
Protein Properties | Length: 200aa MW: 23321.6 Da PI: 8.5935 | ||||||||
Description | WOX family protein | ||||||||
Gene Model |
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Signature Domain? help Back to Top | |||||||
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No. | Domain | Score | E-value | Start | End | HMM Start | HMM End |
1 | Homeobox | 63.9 | 2.3e-20 | 6 | 66 | 2 | 57 |
T--SS--HHHHHHHHHHHHH.SSS--HHHHHHHHHHC....TS-HHHHHHHHHHHHHHHHC CS Homeobox 2 rkRttftkeqleeLeelFek.nrypsaeereeLAkkl....gLterqVkvWFqNrRakekk 57 ++R+++t+eql +Lee+++ r+p+a+++++++++l +++ ++V++WFqN++a++++ RWR84496.1 6 STRWCPTPEQLMILEEMYRGgIRTPNASQIQQITAHLsfygRIEGKNVFYWFQNHKARDRQ 66 58*****************99*************************************996 PP | |||||||
2 | Wus_type_Homeobox | 120.8 | 5.8e-39 | 5 | 67 | 2 | 64 |
Wus_type_Homeobox 2 artRWtPtpeQikiLeelyksGlrtPnkeeiqritaeLeeyGkiedkNVfyWFQNrkaRerqk 64 a+tRW+PtpeQ++iLee+y+ G+rtPn+++iq+ita+L+ yG+ie+kNVfyWFQN+kaR+rqk RWR84496.1 5 ASTRWCPTPEQLMILEEMYRGGIRTPNASQIQQITAHLSFYGRIEGKNVFYWFQNHKARDRQK 67 589***********************************************************9 PP |
Sequence ? help Back to Top |
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Protein Sequence Length: 200 aa Download sequence |
MPQVASTRWC PTPEQLMILE EMYRGGIRTP NASQIQQITA HLSFYGRIEG KNVFYWFQNH 60 KARDRQKLRR RLIRQQQHQQ NQQQPPQQQM EDSAAAIRLP NENPPQFLHQ GALEDTTNQV 120 NFTCQTNIWK KEGMEMEMRN PAMAYGQDWV VMMDVCPTNC CRPLKTLELF PIKSTGLKEE 180 FKPSKPFPCS TSTNYNGLSE |
Best hit in Arabidopsis thaliana ? help Back to Top | ||||||
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Hit ID | E-value | Description | ||||
AT2G28610.1 | 4e-37 | WOX family protein |