PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
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Home TFext BLAST Prediction Download Help About Links PlantRegMap |
Transcription Factor Information
Basic Information? help Back to Top | |||||||||
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TF ID | RWR83100.1 | ||||||||
Organism | |||||||||
Taxonomic ID | |||||||||
Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Magnoliidae; Laurales; Lauraceae; Cinnamomum; Cinnamomum micranthum
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Family | ERF | ||||||||
Protein Properties | Length: 208aa MW: 23197.5 Da PI: 9.6149 | ||||||||
Description | ERF family protein | ||||||||
Gene Model |
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Signature Domain? help Back to Top | |||||||
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No. | Domain | Score | E-value | Start | End | HMM Start | HMM End |
1 | AP2 | 58.5 | 1.6e-18 | 4 | 52 | 1 | 53 |
AP2 1 sgykGVrwdkkrgrWvAeIrdpsengkr..krfslgkfgtaeeAakaaiaarkkl 53 ++++GVr+++ +g+Wv+eIr+p +r++lg+f tae+Aa+a+++a+ + RWR83100.1 4 KKFRGVRQRH-WGSWVSEIRHP-----LlkRRVWLGTFETAEDAARAYDEAAVLM 52 59*******9.**********8.....334*********************9765 PP |
Sequence ? help Back to Top |
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Protein Sequence Length: 208 aa Download sequence |
MVKKKFRGVR QRHWGSWVSE IRHPLLKRRV WLGTFETAED AARAYDEAAV LMSGRNAKTN 60 FPVARIPVGE AMPSRNNPSS PTGLSAIFRE KLRRRCKVPS PALTCLRLDP EKSDLGVWQK 120 GAGTLSESNW VMRVELEKKC AEVSPTTSWT SALPESSAST SAVGGGMEED ERIALQMIEE 180 LLNRNCPSPT PPENVLDYSK KKEDFSVP |
Best hit in Arabidopsis thaliana ? help Back to Top | ||||||
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Hit ID | E-value | Description | ||||
AT1G15360.1 | 8e-57 | ERF family protein |