PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
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Home TFext BLAST Prediction Download Help About Links PlantRegMap |
Transcription Factor Information
Basic Information? help Back to Top | |||||||||
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TF ID | RWR80319.1 | ||||||||
Organism | |||||||||
Taxonomic ID | |||||||||
Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Magnoliidae; Laurales; Lauraceae; Cinnamomum; Cinnamomum micranthum
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Family | NF-YC | ||||||||
Protein Properties | Length: 168aa MW: 18974 Da PI: 4.7302 | ||||||||
Description | NF-YC family protein | ||||||||
Gene Model |
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Signature Domain? help Back to Top | |||||||
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No. | Domain | Score | E-value | Start | End | HMM Start | HMM End |
1 | NF-YC | 33.5 | 9.3e-11 | 69 | 153 | 16 | 99 |
NF-YC 16 fknhelPlarikkilkadedvkm.isaeaPvllskacelfileltlrswlhaeenkrrtlkksdiaaavtrtdifdflvdivprd 99 + n ++P++rik+++k + ++ + e l+ ka e f+ ++ ++ a ++++l+ ++++vt+ + ++fl d vp++ RWR80319.1 69 YSNCSFPMSRIKRLMKNEGVLHFrTTPEFVFLINKATEQFLELFAEDAYACAVRERKKSLNYEHLSSVVTKEKRYEFLSDFVPEK 153 67899***********9988875256789999********8888899***********************************986 PP |
Sequence ? help Back to Top |
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Protein Sequence Length: 168 aa Download sequence |
MGEREIIQLV SSSSASDERD EEGGGGGGEE EEGEEDCMLS TNNTNKDENK EEDKREKSIR 60 GGVGRGPSYS NCSFPMSRIK RLMKNEGVLH FRTTPEFVFL INKATEQFLE LFAEDAYACA 120 VRERKKSLNY EHLSSVVTKE KRYEFLSDFV PEKVRAKDAL SVKSLNES |
Best hit in Arabidopsis thaliana ? help Back to Top | ||||||
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Hit ID | E-value | Description | ||||
AT1G07980.1 | 8e-27 | NF-YC family protein |