PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

RWR76157.1

Organism

Cinnamomum micranthum f. kanehirae

Taxonomic ID

337451

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Magnoliidae; Laurales; Lauraceae; Cinnamomum; Cinnamomum micranthum

Family

MYB_related

Protein Properties

Length: 451aa MW: 51622.2 Da PI: 8.2212

Description

MYB_related family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
RWR76157.1	genome	NCBI	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	Myb_DNA-binding	46.8	6.8e-15	50	93	1	46
TSSS-HHHHHHHHHHHHHTTTT-HHHHHHHHTTTS-HHHHHHHHHH CS Myb_DNA-binding 1 rgrWTteEdellvdavkqlGggtWktIartmgkgRtlkqcksrwqk 46 +g WT++Ed++l +a k +G++ W+ Ia+ + gRt++ +k+r+ + RWR76157.1 50 KGCWTEQEDKILCEAQKIYGNR-WTEIAKVVS-GRTDNAVKNRFST 93 799*****************.*****.********976 PP

Sequence ? help Back to Top
Protein Sequence Length: 451 aa Download sequence
MHAMKLPQDA RKFEGWKQSD RRIVTWTPQL MEMSCCYCRW YTYLNSECKK GCWTEQEDKI 60 LCEAQKIYGN RWTEIAKVVS GRTDNAVKNR FSTLCKKQAK LQATTKENSN EHINLNNKRV 120 IIQDRHTAAG TSGSMTPLKE MRMHISDFTR NCNMKERWFQ ESANAKQMQL RSPLAVLVQN 180 SNVGNGPTQQ HLINHCRVAV DDDLKVQGMF LRKNDSKVTA LMQQSKFFSL LTREVNMENT 240 SQSIENAWKV LHNFLARYEE SKQLRCEILE MEFLLKNFKD LVEDQNSSTT ESRQSLRQLD 300 LHDESQGSSE YSTGSTQHWH PTDNKIVEHQ SEGCLINHST SIKRETENRQ VQINGGSKEG 360 CSATASIDKA AIMPSSDEPR DGDGAICKRS NTEFSSPLQM VPFFQHFEEG IPSPRFTDSE 420 RHFLLKTLGL ASPSVNANTN PSCRRALLHS L

Sequence ? help Back to Top

Protein Sequence Length: 451 aa Download sequence

MHAMKLPQDA RKFEGWKQSD RRIVTWTPQL MEMSCCYCRW YTYLNSECKK GCWTEQEDKI  60
LCEAQKIYGN RWTEIAKVVS GRTDNAVKNR FSTLCKKQAK LQATTKENSN EHINLNNKRV  120
IIQDRHTAAG TSGSMTPLKE MRMHISDFTR NCNMKERWFQ ESANAKQMQL RSPLAVLVQN  180
SNVGNGPTQQ HLINHCRVAV DDDLKVQGMF LRKNDSKVTA LMQQSKFFSL LTREVNMENT  240
SQSIENAWKV LHNFLARYEE SKQLRCEILE MEFLLKNFKD LVEDQNSSTT ESRQSLRQLD  300
LHDESQGSSE YSTGSTQHWH PTDNKIVEHQ SEGCLINHST SIKRETENRQ VQINGGSKEG  360
CSATASIDKA AIMPSSDEPR DGDGAICKRS NTEFSSPLQM VPFFQHFEEG IPSPRFTDSE  420
RHFLLKTLGL ASPSVNANTN PSCRRALLHS L

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT2G02820.2	1e-101	MYB family protein