PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

RWR75084.1

Organism

Cinnamomum micranthum f. kanehirae

Taxonomic ID

337451

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Magnoliidae; Laurales; Lauraceae; Cinnamomum; Cinnamomum micranthum

Family

ARR-B

Protein Properties

Length: 658aa MW: 70783.3 Da PI: 6.7808

Description

ARR-B family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
RWR75084.1	genome	NCBI	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	G2-like	89.5	2.9e-28	222	275	1	55
G2-like 1 kprlrWtpeLHerFveaveqLGGsekAtPktilelmkvkgLtlehvkSHLQkYRl 55 kpr++W+ eLH++Fv+av+qL G++kA+Pk+ilelm+v+gLt+e+v+SHLQk+Rl RWR75084.1 222 KPRVVWSVELHQQFVSAVNQL-GIDKAVPKRILELMNVPGLTRENVASHLQKFRL 275 79*****************.******************************8 PP
2	Myb_DNA-binding	40.3	7.6e-13	224	274	1	48
TSSS-HHHHHHHHHHHHHTTTT..-HHHHHHHHT.TTS-HHHHHHHHHHHT CS Myb_DNA-binding 1 rgrWTteEdellvdavkqlGgg..tWktIartmg.kgRtlkqcksrwqkyl 48 r W+ e+++++v av+qlG + +k+I + m+ g+t++++ s++qk++ RWR75084.1 224 RVVWSVELHQQFVSAVNQLGIDkaVPKRILELMNvPGLTRENVASHLQKFR 274 678**********************************************97 PP
3	Response_reg	79.4	1.2e-26	37	145	1	109
EEEESSSHHHHHHHHHHHHHTTCEEEEEESSHHHHHHHHHHHH..ESEEEEESSCTTSEHHHHHHHHHHHTTTSEEEEEESTTTHHHHHHHHHTTES CS Response_reg 1 vlivdDeplvrellrqalekegyeevaeaddgeealellkekd..pDlillDiempgmdGlellkeireeepklpiivvtahgeeedalealkaGak 95 vl+vdD+ + +++l+q+l+k y +v+++ ++++al ll+ek+ +D+++ D+ mp+mdG++ll+ e+ lp+i+++a g + + + +k Ga RWR75084.1 37 VLVVDDDTACLKILEQMLRKCLY-QVTTCCQAKSALSLLREKKggYDVVISDVHMPDMDGFKLLELVGL-EMGLPVIMMSADGRTSAVMRGIKHGAC 131 89*******************.***********999999***************97754.558******************** PP EEEESS--HHHHHH CS Response_reg 96 dflsKpfdpeelvk 109 d+l Kp+ eel + RWR75084.1 132 DYLIKPVRLEELKN 145 *********986 PP

Sequence ? help Back to Top
Protein Sequence Length: 658 aa Download sequence
MATVQKLPAS SLSTANSYGA CTVGSVVPDK FPVGLRVLVV DDDTACLKIL EQMLRKCLYQ 60 VTTCCQAKSA LSLLREKKGG YDVVISDVHM PDMDGFKLLE LVGLEMGLPV IMMSADGRTS 120 AVMRGIKHGA CDYLIKPVRL EELKNIWQHV VRKKWNENKE LEHSGSVEDA DRHRRLGDDA 180 EYASSVNEGT DASWKVQKRR KDTKEDEDDG ELDNDDPSTS KKPRVVWSVE LHQQFVSAVN 240 QLGIDKAVPK RILELMNVPG LTRENVASHL QKFRLYLKRL SGVTQHQSGI PGSFCGSTEP 300 NGKHGSLSRL EIQALAASGQ IPPQTLAALQ AELLGRPTGS IVLPAMDQPL LLQASLQGGK 360 CIPVERGVAF GQPLIKCQSN VSKQFPQPTI TVDDIPHGYT TWPPNHLGAL GPAGNIGGLN 420 TQNSTMHVQA LPQHQQQQST LPESSHTINV QPSCLVVPSS SNGFQSGSIP VPINQSSGFI 480 NNTIAVNYST LPSQSNNISL GGGQVPDGDF KNVGVLNGYS IQDTSICSSL SSSSVCAESS 540 TGWRVQTPAM TINPSSSLSG FMSNICEIPD SYGTKAGIVT DQGRGRNLGF VGKGMSIPSR 600 FAVDDIELPA EELSHGKVGA KNGGDRVKQE LNMEFMEGAK VGMPLQYSSS DLMSVLSK

Sequence ? help Back to Top

Protein Sequence Length: 658 aa Download sequence

MATVQKLPAS SLSTANSYGA CTVGSVVPDK FPVGLRVLVV DDDTACLKIL EQMLRKCLYQ  60
VTTCCQAKSA LSLLREKKGG YDVVISDVHM PDMDGFKLLE LVGLEMGLPV IMMSADGRTS  120
AVMRGIKHGA CDYLIKPVRL EELKNIWQHV VRKKWNENKE LEHSGSVEDA DRHRRLGDDA  180
EYASSVNEGT DASWKVQKRR KDTKEDEDDG ELDNDDPSTS KKPRVVWSVE LHQQFVSAVN  240
QLGIDKAVPK RILELMNVPG LTRENVASHL QKFRLYLKRL SGVTQHQSGI PGSFCGSTEP  300
NGKHGSLSRL EIQALAASGQ IPPQTLAALQ AELLGRPTGS IVLPAMDQPL LLQASLQGGK  360
CIPVERGVAF GQPLIKCQSN VSKQFPQPTI TVDDIPHGYT TWPPNHLGAL GPAGNIGGLN  420
TQNSTMHVQA LPQHQQQQST LPESSHTINV QPSCLVVPSS SNGFQSGSIP VPINQSSGFI  480
NNTIAVNYST LPSQSNNISL GGGQVPDGDF KNVGVLNGYS IQDTSICSSL SSSSVCAESS  540
TGWRVQTPAM TINPSSSLSG FMSNICEIPD SYGTKAGIVT DQGRGRNLGF VGKGMSIPSR  600
FAVDDIELPA EELSHGKVGA KNGGDRVKQE LNMEFMEGAK VGMPLQYSSS DLMSVLSK

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT4G16110.1	1e-125	ARR-B family protein