PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
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Home TFext BLAST Prediction Download Help About Links PlantRegMap |
Transcription Factor Information
Basic Information? help Back to Top | |||||||||
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TF ID | RWR74291.1 | ||||||||
Organism | |||||||||
Taxonomic ID | |||||||||
Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Magnoliidae; Laurales; Lauraceae; Cinnamomum; Cinnamomum micranthum
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Family | NAC | ||||||||
Protein Properties | Length: 444aa MW: 49899.8 Da PI: 5.6968 | ||||||||
Description | NAC family protein | ||||||||
Gene Model |
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Signature Domain? help Back to Top | |||||||
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No. | Domain | Score | E-value | Start | End | HMM Start | HMM End |
1 | NAM | 101.4 | 1.2e-31 | 102 | 244 | 1 | 128 |
NAM 1 lppGfrFhPtdeelvveyLkkkvegkk.....leleev.ikev.diykvePwdLpkkvkaeekewyfFskrdkkyatgkrknra........tksgyWk 84 lp+G++F+P+d el+ + k+ g++ ++++ ++e +i++++P++Lp vk++ ++++fF++++++yatg+rk+r+ +++ +W+ RWR74291.1 102 LPAGVKFDPSDAELLEHLAGKRWLGNSkphvfIDEFIPtLNEDeGICYTHPENLP-GVKKDGSSVHFFHRTSNAYATGQRKRRKihrpctvsAEHVRWH 199 799************655555566666566443332222333337**********.7778889********************87888877777999** PP NAM 85 atgkdkevlskkgelvglkktLvfy..kgrapkgektdWvmheyrl 128 +tgk+k+v++ +g ++g kk++v+y ++r +k+ k++Wvmh+y+l RWR74291.1 200 KTGKTKPVIE-NGVHKGWKKIMVLYksSKRGSKPDKSNWVMHQYHL 244 **********.999***********4435777888*********98 PP |
Sequence ? help Back to Top |
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Protein Sequence Length: 444 aa Download sequence |
MDVCGSSPDA GCSSRGEGVF PCFFFFFLLS CFCNSHKASS SSSSAMAKAW LIDSRGIARK 60 VKNATQFSTN QIKDIGAEAN RQCPNCSYRI DNSDVSIEWP GLPAGVKFDP SDAELLEHLA 120 GKRWLGNSKP HVFIDEFIPT LNEDEGICYT HPENLPGVKK DGSSVHFFHR TSNAYATGQR 180 KRRKIHRPCT VSAEHVRWHK TGKTKPVIEN GVHKGWKKIM VLYKSSKRGS KPDKSNWVMH 240 QYHLGTEEDE KEGEFVVSKV FYQQQSKQVT ENLIIEESDT LTVRASPKTP KTNPPQPRRS 300 EKHALYDETD EDKIQHLPVQ DAEFISKVPD CPLSSVHLGD ESLNPAWLAG ESQSVDDPNL 360 IDIDESLLCN EILDSFPPFD EPGLKHIPYF SDCSHRSEPI EQDLNSLSRI PDLDNIEVDT 420 PPDFQLADLQ FGSQESILGW LDRL |
Best hit in Arabidopsis thaliana ? help Back to Top | ||||||
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Hit ID | E-value | Description | ||||
AT1G25580.1 | 1e-94 | NAC family protein |