PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

RDY08973.1

Organism

Mucuna pruriens

Taxonomic ID

157652

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Fabales; Fabaceae; Papilionoideae; 50 kb inversion clade; NPAAA clade; indigoferoid/millettioid clade; Phaseoleae; Mucuna

Family

AP2

Protein Properties

Length: 402aa MW: 44523.2 Da PI: 5.9698

Description

AP2 family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
RDY08973.1	genome	NCBI	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	AP2	54	4.1e-17	74	124	3	56
AP2 3 ykGVrwdkkrgrWvAeIrdpsengkrkrfslgkfgtaeeAakaaiaarkklege 56 y GVr ++ +g+++AeIrd + ng +r++lg+f+ ae Aa a+++a+ +++g+ RDY08973.1 74 YIGVRKRP-WGKFAAEIRDTTRNG--ARVWLGTFDCAEAAALAYDQAAFSMRGH 124 89****.******54465..************************97 PP
2	AP2	53.9	4.5e-17	265	315	3	56
AP2 3 ykGVrwdkkrgrWvAeIrdpsengkrkrfslgkfgtaeeAakaaiaarkklege 56 y GVr ++ +g+++AeIrd + ng +r++lg+f +ae Aa a+++a+ +++g+ RDY08973.1 265 YIGVRKRP-WGKFAAEIRDTTRNG--TRVWLGTFESAEAAALAYDQAAFSMRGH 315 89****.******54465..************************97 PP

Sequence ? help Back to Top
Protein Sequence Length: 402 aa Download sequence
MSSSPLFQKP DWDMLQEPSE MLLESLSSNA VLDPLQDSLS FDMVDFSTEP TEGNHSDAKQ 60 LMAKSQVQNK ERSYIGVRKR PWGKFAAEIR DTTRNGARVW LGTFDCAEAA ALAYDQAAFS 120 MRGHNAVLNF SVKRVKESLQ EIQYGCRNGS SPALALKERH CIQRKLSSKA NKCKEKQESE 180 APTPSVVVLE DLGVEYLEQL LSISDQCDPS EMLFESLSSN DVHDPLLDSL SFDMVDFSTA 240 PTEGNHNEAK PLVVKSQVQN KERSYIGVRK RPWGKFAAEI RDTTRNGTRV WLGTFESAEA 300 AALAYDQAAF SMRGHSAVLN FPVKTVKESL KEIQYSCCNG SSPALALKER HCIQRKLSSK 360 AKKCKGKETS SEAATASVMV LEDLGVDYLE QLLSISDQSA SP

Sequence ? help Back to Top

Protein Sequence Length: 402 aa Download sequence

MSSSPLFQKP DWDMLQEPSE MLLESLSSNA VLDPLQDSLS FDMVDFSTEP TEGNHSDAKQ  60
LMAKSQVQNK ERSYIGVRKR PWGKFAAEIR DTTRNGARVW LGTFDCAEAA ALAYDQAAFS  120
MRGHNAVLNF SVKRVKESLQ EIQYGCRNGS SPALALKERH CIQRKLSSKA NKCKEKQESE  180
APTPSVVVLE DLGVEYLEQL LSISDQCDPS EMLFESLSSN DVHDPLLDSL SFDMVDFSTA  240
PTEGNHNEAK PLVVKSQVQN KERSYIGVRK RPWGKFAAEI RDTTRNGTRV WLGTFESAEA  300
AALAYDQAAF SMRGHSAVLN FPVKTVKESL KEIQYSCCNG SSPALALKER HCIQRKLSSK  360
AKKCKGKETS SEAATASVMV LEDLGVDYLE QLLSISDQSA SP

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT3G23240.1	2e-45	ERF family protein