PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
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Home TFext BLAST Prediction Download Help About Links PlantRegMap |
Transcription Factor Information
Basic Information? help Back to Top | |||||||||
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TF ID | RDY08972.1 | ||||||||
Organism | |||||||||
Taxonomic ID | |||||||||
Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Fabales; Fabaceae; Papilionoideae; 50 kb inversion clade; NPAAA clade; indigoferoid/millettioid clade; Phaseoleae; Mucuna
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Family | ERF | ||||||||
Protein Properties | Length: 213aa MW: 23752.8 Da PI: 5.1118 | ||||||||
Description | ERF family protein | ||||||||
Gene Model |
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Signature Domain? help Back to Top | |||||||
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No. | Domain | Score | E-value | Start | End | HMM Start | HMM End |
1 | AP2 | 56.1 | 9.2e-18 | 70 | 120 | 3 | 56 |
AP2 3 ykGVrwdkkrgrWvAeIrdpsengkrkrfslgkfgtaeeAakaaiaarkklege 56 y GVr ++ +g+++AeIrd + ng +r++lg+f++ e Aa a+++a+ +++g+ RDY08972.1 70 YIGVRKRP-WGKFAAEIRDTTRNG--ARVWLGTFDSVEAAALAYDQAAFCMRGH 120 89******.**********54465..**************************97 PP |
Sequence ? help Back to Top |
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Protein Sequence Length: 213 aa Download sequence |
MISLLFQSPD WDMMQEPSEM LFESLSSNDV LDPLYDSLSF DMVDFSTAPT DNEAKQLMVK 60 SQVQNKERSY IGVRKRPWGK FAAEIRDTTR NGARVWLGTF DSVEAAALAY DQAAFCMRGH 120 NAVLNFPVKT VKESLKEIQY SCCNGSSPAL ALKERHCTQR KLSSKAKKCK GKETSSSSEA 180 ATPSVMVLED LGVDYLEQLL SLSDQSSSPS YFN |
Best hit in Arabidopsis thaliana ? help Back to Top | ||||||
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Hit ID | E-value | Description | ||||
AT3G23240.1 | 9e-46 | ERF family protein |