PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
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Home TFext BLAST Prediction Download Help About Links PlantRegMap |
Transcription Factor Information
Basic Information? help Back to Top | |||||||||
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TF ID | RDY06669.1 | ||||||||
Organism | |||||||||
Taxonomic ID | |||||||||
Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Fabales; Fabaceae; Papilionoideae; 50 kb inversion clade; NPAAA clade; indigoferoid/millettioid clade; Phaseoleae; Mucuna
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Family | ERF | ||||||||
Protein Properties | Length: 236aa MW: 25950.4 Da PI: 8.0639 | ||||||||
Description | ERF family protein | ||||||||
Gene Model |
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Signature Domain? help Back to Top | |||||||
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No. | Domain | Score | E-value | Start | End | HMM Start | HMM End |
1 | AP2 | 63 | 6.5e-20 | 89 | 138 | 2 | 55 |
AP2 2 gykGVrwdkkrgrWvAeIrdpsengkr.krfslgkfgtaeeAakaaiaarkkleg 55 y+G+r+++ +g+W+AeIrdp + r++lg+f taeeAa+a++ a+ +++g RDY06669.1 89 VYRGIRQRP-WGKWAAEIRDPH----KgVRVWLGTFPTAEEAARAYDDAAIRIRG 138 69*******.**********72....35************************997 PP |
Sequence ? help Back to Top |
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Protein Sequence Length: 236 aa Download sequence |
MCGGAIISGF IGVNHGRNLA AQELWSELDP FSDLLPFDTA VTAATSKYQP PLPKIPDKKV 60 VACDKKRKSL GAEKGAGSGK KSERARKNVY RGIRQRPWGK WAAEIRDPHK GVRVWLGTFP 120 TAEEAARAYD DAAIRIRGDK AKLNFPATPP PPSKKRCLTP DLTEQSSSRS TGPPPSASVH 180 GGDEELDLKE QISNLEWFLG LENEQAVTSG VEWGNGYVDD LWMLDDVVMP DRHLVY |
Best hit in Arabidopsis thaliana ? help Back to Top | ||||||
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Hit ID | E-value | Description | ||||
AT3G16770.1 | 5e-39 | ERF family protein |