PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
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Home TFext BLAST Prediction Download Help About Links PlantRegMap |
Transcription Factor Information
Basic Information? help Back to Top | |||||||||
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TF ID | RDY01684.1 | ||||||||
Organism | |||||||||
Taxonomic ID | |||||||||
Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Fabales; Fabaceae; Papilionoideae; 50 kb inversion clade; NPAAA clade; indigoferoid/millettioid clade; Phaseoleae; Mucuna
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Family | ERF | ||||||||
Protein Properties | Length: 168aa MW: 18821.3 Da PI: 9.8424 | ||||||||
Description | ERF family protein | ||||||||
Gene Model |
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Signature Domain? help Back to Top | |||||||
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No. | Domain | Score | E-value | Start | End | HMM Start | HMM End |
1 | AP2 | 60.7 | 3.3e-19 | 68 | 119 | 2 | 56 |
AP2 2 gykGVrwdkkrgrWvAeIrdpseng.kr.krfslgkfgtaeeAakaaiaarkklege 56 +y+GVr+++ +g+++AeIrd ++ +r++lg+f taeeAa a+++a+ k++g+ RDY01684.1 68 HYRGVRRRP-WGKYAAEIRD----SaRHgARVWLGTFQTAEEAAMAYDRAAFKMRGA 119 8********.**********....33236**************************95 PP |
Sequence ? help Back to Top |
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Protein Sequence Length: 168 aa Download sequence |
MMGSKKNYSE EGALLISQGQ TDLPFNENDP QDMVIYQVLN EANALSNTFL PQRPPMGLEP 60 TRNIAKKHYR GVRRRPWGKY AAEIRDSARH GARVWLGTFQ TAEEAAMAYD RAAFKMRGAK 120 ALLNFPAEIV AAADLSFSNI HDAGSSNSTQ VRAFELYSPS ILFKFTKF |
Best hit in Arabidopsis thaliana ? help Back to Top | ||||||
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Hit ID | E-value | Description | ||||
AT5G47220.1 | 1e-30 | ERF family protein |