PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

RDX97456.1

Organism

Mucuna pruriens

Taxonomic ID

157652

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Fabales; Fabaceae; Papilionoideae; 50 kb inversion clade; NPAAA clade; indigoferoid/millettioid clade; Phaseoleae; Mucuna

Family

AP2

Protein Properties

Length: 401aa MW: 45138.7 Da PI: 5.6401

Description

AP2 family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
RDX97456.1	genome	NCBI	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	AP2	36.8	9.5e-12	53	109	1	55
AP2 1 sgykGVrwdkkrgrWvAeIrd.pseng.krkrfslgkfgtaeeAakaaiaarkkleg 55 s y+GV++++++gr++A+++d s+n+ ++k+ + g ++t+e A + ++ a++k++g RDX97456.1 53 SIYRGVTRHRWTGRFEAHLWDkSSWNNiQSKKGRQGAYDTEEAAGRTYDLAALKYWG 109 57*****************777798888888***99999********98 PP
2	AP2	50.9	3.8e-16	152	203	1	55
AP2 1 sgykGVrwdkkrgrWvAeIrdpsengkrkrfslgkfgtaeeAakaaiaarkkleg 55 s+y+GV +++ +grW+A+I ++ +k+ +lg++ t eeAa a++ a+ +++g RDX97456.1 152 SKYRGVARHHHNGRWEARIGRVCG---NKYLYLGTYKTQEEAAVAYDMAAIEYRG 203 89**99*******99644...4***********************98 PP

Sequence ? help Back to Top
Protein Sequence Length: 401 aa Download sequence
MKRSPASSCS SSSSFVGFET PPIEKRKPKH PRRNLKSQKC KQGQNTDTGR RSSIYRGVTR 60 HRWTGRFEAH LWDKSSWNNI QSKKGRQGAY DTEEAAGRTY DLAALKYWGQ DATLNFPIET 120 YTKEIEEMDK VSKEEYLASL RRQSSGFSRG ISKYRGVARH HHNGRWEARI GRVCGNKYLY 180 LGTYKTQEEA AVAYDMAAIE YRGLNAVTNF DISNYMDKIK KKNDQTQQQQ TEPHTETPPN 240 SSDSEEAEVE QQTTKPLPPL SENLHMPPQQ HQVQESSSPV TIMDHVLDQD LSWSFMYTGL 300 SQFQDPDLAF SKADDDLVGM FDDAGFEEDI DFLFSTDPGE TESDINMSEV LGSIECGGTN 360 GAGGSMVHVD NNQNKILSTF ASSSPSSTTT TESRESLWLG I

Sequence ? help Back to Top

Protein Sequence Length: 401 aa Download sequence

MKRSPASSCS SSSSFVGFET PPIEKRKPKH PRRNLKSQKC KQGQNTDTGR RSSIYRGVTR  60
HRWTGRFEAH LWDKSSWNNI QSKKGRQGAY DTEEAAGRTY DLAALKYWGQ DATLNFPIET  120
YTKEIEEMDK VSKEEYLASL RRQSSGFSRG ISKYRGVARH HHNGRWEARI GRVCGNKYLY  180
LGTYKTQEEA AVAYDMAAIE YRGLNAVTNF DISNYMDKIK KKNDQTQQQQ TEPHTETPPN  240
SSDSEEAEVE QQTTKPLPPL SENLHMPPQQ HQVQESSSPV TIMDHVLDQD LSWSFMYTGL  300
SQFQDPDLAF SKADDDLVGM FDDAGFEEDI DFLFSTDPGE TESDINMSEV LGSIECGGTN  360
GAGGSMVHVD NNQNKILSTF ASSSPSSTTT TESRESLWLG I

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT3G54320.3	1e-103	AP2 family protein