PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

RDX92737.1

Organism

Mucuna pruriens

Taxonomic ID

157652

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Fabales; Fabaceae; Papilionoideae; 50 kb inversion clade; NPAAA clade; indigoferoid/millettioid clade; Phaseoleae; Mucuna

Family

HD-ZIP

Protein Properties

Length: 250aa MW: 28108.8 Da PI: 9.9175

Description

HD-ZIP family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
RDX92737.1	genome	NCBI	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	Homeobox	55.9	7.2e-18	78	132	2	56
T--SS--HHHHHHHHHHHHHSSS--HHHHHHHHHHCTS-HHHHHHHHHHHHHHHH CS Homeobox 2 rkRttftkeqleeLeelFeknrypsaeereeLAkklgLterqVkvWFqNrRakek 56 rk+ ++tkeq Lee F+++++++ +++ LA+kl+L+ rqV vWFqNrRa+ k RDX92737.1 78 RKKLRLTKEQSMLLEETFKEHNTLNPKRKLALAEKLSLKPRQVEVWFQNRRARTK 132 788899***********************************************98 PP
2	HD-ZIP_I/II	126.4	1.2e-40	78	167	1	91
HD-ZIP_I/II 1 ekkrrlskeqvklLEesFeeeekLeperKvelareLglqprqvavWFqnrRARtktkqlEkdyeaLkraydalkeenerLekeveeLreel 91 +kk+rl+keq+ lLEe+F+e+++L+p+rK +la++L l+prqv+vWFqnrRARtk+kq+E+d+e+Lkr++++l+een+rL+kev+eLr +l RDX92737.1 78 RKKLRLTKEQSMLLEETFKEHNTLNPKRKLALAEKLSLKPRQVEVWFQNRRARTKLKQTEVDCEYLKRCCENLTEENRRLHKEVQELR-AL 167 69*************************************************************************************9.55 PP

Sequence ? help Back to Top
Protein Sequence Length: 250 aa Download sequence
MQLHVADRSS DVIRQIDVNS AAECDEDNGV SSPNSAVSSV SGGKRSERDN DNAAVAASER 60 TSCSRGSDDE DGGGDAARKK LRLTKEQSML LEETFKEHNT LNPKRKLALA EKLSLKPRQV 120 EVWFQNRRAR TKLKQTEVDC EYLKRCCENL TEENRRLHKE VQELRALKLS PQMYMHMNPP 180 TTLTMCPSCE RAHSSSSSSP ATVHSRVAPS NRKLFGANVQ RSRKRIRICD VLINLGYHFL 240 GKRWGGGKRV

Nucleic Localization Signal ? help Back to Top

No.	Start	End	Sequence
1	127	135	RRARTKLKQ

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT5G47370.1	2e-68	HD-ZIP family protein