PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
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Home TFext BLAST Prediction Download Help About Links PlantRegMap |
Transcription Factor Information
Basic Information? help Back to Top | |||||||||
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TF ID | RDX90701.1 | ||||||||
Organism | |||||||||
Taxonomic ID | |||||||||
Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Fabales; Fabaceae; Papilionoideae; 50 kb inversion clade; NPAAA clade; indigoferoid/millettioid clade; Phaseoleae; Mucuna
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Family | ERF | ||||||||
Protein Properties | Length: 342aa MW: 38030.2 Da PI: 7.8107 | ||||||||
Description | ERF family protein | ||||||||
Gene Model |
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Signature Domain? help Back to Top | |||||||
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No. | Domain | Score | E-value | Start | End | HMM Start | HMM End |
1 | AP2 | 55 | 2.1e-17 | 45 | 94 | 2 | 55 |
AP2 2 gykGVrwdkkrgrWvAeIrdpsengkr.krfslgkfgtaeeAakaaiaarkkleg 55 +y+GVr+++ +gr++AeIrdp + r +lg+f+taeeAa a++ a+++++g RDX90701.1 45 RYRGVRRRP-WGRYAAEIRDPQ----SkERRWLGTFDTAEEAACAYDCAARAMRG 94 59*******.**********93....35999**********************97 PP |
Sequence ? help Back to Top |
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Protein Sequence Length: 342 aa Download sequence |
MEEALRRLNG MAPIQEPDIT SDHPPKKCAT KRALRETANS GTAIRYRGVR RRPWGRYAAE 60 IRDPQSKERR WLGTFDTAEE AACAYDCAAR AMRGVKARTN FVYPDAAEPH LFQPFSIPKQ 120 FHVSRFGQNP NLGGDFSASS NQHNNASSLN MLLFRDFLNS SSNPCLLSSS SSSQQFHNNN 180 KPATGYVNSS SLSSSATNCL QGCCVGNNAN IINANNGTEV VETIDEDSEF FPRESPDSGL 240 LEEIVHKFLP KSKPKNETST SSVSESLPQP IFDHRVFSAT RGYDDTRMRV PKMEGFGVSY 300 DSPMQQFEAL NGFNGFNTMQ GRENPSGNGI GDWRVLWEKV KH |
Best hit in Arabidopsis thaliana ? help Back to Top | ||||||
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Hit ID | E-value | Description | ||||
AT1G24590.1 | 3e-13 | ERF family protein |