PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

RDX87231.1

Organism

Mucuna pruriens

Taxonomic ID

157652

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Fabales; Fabaceae; Papilionoideae; 50 kb inversion clade; NPAAA clade; indigoferoid/millettioid clade; Phaseoleae; Mucuna

Family

bHLH

Protein Properties

Length: 561aa MW: 63145.4 Da PI: 8.3638

Description

bHLH family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
RDX87231.1	genome	NCBI	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	HLH	36.3	1e-11	377	421	5	54
HHHHHHHHHHHHHHHHHHHHCTSCCC...TTS-STCHHHHHHHHHHHHHH CS HLH 5 hnerErrRRdriNsafeeLrellPkaskapskKlsKaeiLekAveYIksL 54 h + ErrRR++iN+ f+ Lr llP+ +K +Ka+iL A e ++sL RDX87231.1 377 HMISERRRREKINENFQALRALLPPG-----TKKDKASILIAAKETLSSL 421 8899******************97.....8*********9998887 PP

Sequence ? help Back to Top
Protein Sequence Length: 561 aa Download sequence
RHKTHTLLSH GHDAKALASS SMHPMESVFS LPVTARAEFI QILVQSFGCS YICLWAYDSI 60 SPNRLRFLDG FYNVRNNQPS SSLGTVAQQL FSQFRTLTFD VNNDCVPGLA FRNQSPYLEL 120 QQLELLRLAS TEIQTQFFQE ARIQLYHEPG ILFKSPLVPY SSQTAVFMGC NKGEIELGFL 180 NMSQVDIQTA LRSLFPEDFS TRQSQQIDQN PPTSSSSSLR SISTGSPESS SLLFSSIPGS 240 SQPHFAETLG GGRVPPMQPV PNTATSTHQQ AIQALTQVPL TQFPTQEVEH DAIMRAILNV 300 ISPTSHQHQN LPYAPVVHPE ASAFQRYNPD VGPNMASNFR RLSLMRRSFA FFRNLNFMRM 360 RERIQATSRT TNTQLHHMIS ERRRREKINE NFQALRALLP PGTKKDKASI LIAAKETLSS 420 LMAEIDKLSK TNQGLTSILP AKESTTEETK ASLSSNERLN VRVSHVPESS SSEERMVDLQ 480 VNVRGQISQI DLLIRLLEFF KQAHHVSLVS MDANTHIAEV NNVLHQLTFR LRIQGSEWDE 540 SSFQEAVRRV VAHLAQYQVD Q

Sequence ? help Back to Top

Protein Sequence Length: 561 aa Download sequence

RHKTHTLLSH GHDAKALASS SMHPMESVFS LPVTARAEFI QILVQSFGCS YICLWAYDSI  60
SPNRLRFLDG FYNVRNNQPS SSLGTVAQQL FSQFRTLTFD VNNDCVPGLA FRNQSPYLEL  120
QQLELLRLAS TEIQTQFFQE ARIQLYHEPG ILFKSPLVPY SSQTAVFMGC NKGEIELGFL  180
NMSQVDIQTA LRSLFPEDFS TRQSQQIDQN PPTSSSSSLR SISTGSPESS SLLFSSIPGS  240
SQPHFAETLG GGRVPPMQPV PNTATSTHQQ AIQALTQVPL TQFPTQEVEH DAIMRAILNV  300
ISPTSHQHQN LPYAPVVHPE ASAFQRYNPD VGPNMASNFR RLSLMRRSFA FFRNLNFMRM  360
RERIQATSRT TNTQLHHMIS ERRRREKINE NFQALRALLP PGTKKDKASI LIAAKETLSS  420
LMAEIDKLSK TNQGLTSILP AKESTTEETK ASLSSNERLN VRVSHVPESS SSEERMVDLQ  480
VNVRGQISQI DLLIRLLEFF KQAHHVSLVS MDANTHIAEV NNVLHQLTFR LRIQGSEWDE  540
SSFQEAVRRV VAHLAQYQVD Q

Nucleic Localization Signal ? help Back to Top

No.	Start	End	Sequence
1	381	386	ERRRRE
2	382	387	RRRREK

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT5G56960.1	2e-58	bHLH family protein