PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
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Home TFext BLAST Prediction Download Help About Links PlantRegMap |
Transcription Factor Information
Basic Information? help Back to Top | |||||||||
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TF ID | RDX87055.1 | ||||||||
Organism | |||||||||
Taxonomic ID | |||||||||
Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Fabales; Fabaceae; Papilionoideae; 50 kb inversion clade; NPAAA clade; indigoferoid/millettioid clade; Phaseoleae; Mucuna
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Family | ERF | ||||||||
Protein Properties | Length: 161aa MW: 18088.6 Da PI: 10.1344 | ||||||||
Description | ERF family protein | ||||||||
Gene Model |
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Signature Domain? help Back to Top | |||||||
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No. | Domain | Score | E-value | Start | End | HMM Start | HMM End |
1 | AP2 | 29.8 | 1.5e-09 | 21 | 60 | 3 | 47 |
AP2 3 ykGVrwdkkrgrWvAeIrdpseng.krkrfslgkfgtaeeAakaai 47 y+GV++d +g+W A+ + g + + lg f+t+eeAa+a + RDX87055.1 21 YRGVTRDFCNGKWQAS---F---GiGSDYRFLGIFDTEEEAARASD 60 9***************...6...54469***************987 PP |
Sequence ? help Back to Top |
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Protein Sequence Length: 161 aa Download sequence |
MDVVDTVRRL SFTFSKSISM YRGVTRDFCN GKWQASFGIG SDYRFLGIFD TEEEAARASD 60 VESIRSRGHK AITNFNTKFY DVDAILRGET DDEKVICKLK GTVALEAMQP FEGLQNLIGK 120 GTSSTMFYGP GNMNGGRFRN LHIRKHVRTG KLRGIGLTRC K |
Best hit in Arabidopsis thaliana ? help Back to Top | ||||||
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Hit ID | E-value | Description | ||||
AT1G51190.1 | 3e-21 | AP2 family protein |