PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

RDX86527.1

Organism

Mucuna pruriens

Taxonomic ID

157652

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Fabales; Fabaceae; Papilionoideae; 50 kb inversion clade; NPAAA clade; indigoferoid/millettioid clade; Phaseoleae; Mucuna

Family

C2H2

Protein Properties

Length: 277aa MW: 31068.5 Da PI: 8.7488

Description

C2H2 family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
RDX86527.1	genome	NCBI	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	zf-C2H2	10.9	0.0014	103	125	1	23
EEETTTTEEESSHHHHHHHHHHT CS zf-C2H2 1 ykCpdCgksFsrksnLkrHirtH 23 y+C+ C+++F++ L H +H RDX86527.1 103 YECKTCNRCFPSFQALGGHRASH 125 99**********99999998887 PP
2	zf-C2H2	13.5	0.00022	187	209	1	23
EEETTTTEEESSHHHHHHHHHHT CS zf-C2H2 1 ykCpdCgksFsrksnLkrHirtH 23 ++C++Cg F++ L H+r+H RDX86527.1 187 HECSICGAEFTSGQALGGHMRRH 209 78********************9 PP

Sequence ? help Back to Top
Protein Sequence Length: 277 aa Download sequence
MQEHQEELRN MQIMKGKRTK RQRLPSPLRL TMSTCSSSLG RSSTDNSVGF DVPTTSNELR 60 NNGTEEEDMA NCLILLARGR NNTPKSRPDH HHNKGGGGGV YLYECKTCNR CFPSFQALGG 120 HRASHKKYSK ANTEEKQGVV TTFVNEVDHK HDGYCDPTST TLTLQLSTAL YNSNGTTRPF 180 NAKSKVHECS ICGAEFTSGQ ALGGHMRRHR NTPTSGAIAN GRDETHEIPE TKKHKDVLNL 240 DLNLPAPEDD HRDSKLFPFQ SKENINQRHA REKIERE

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT5G04390.1	1e-46	C2H2 family protein