PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
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Transcription Factor Information
Basic Information? help Back to Top | |||||||||
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TF ID | RDX85784.1 | ||||||||
Organism | |||||||||
Taxonomic ID | |||||||||
Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Fabales; Fabaceae; Papilionoideae; 50 kb inversion clade; NPAAA clade; indigoferoid/millettioid clade; Phaseoleae; Mucuna
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Family | C2H2 | ||||||||
Protein Properties | Length: 326aa MW: 36368.1 Da PI: 8.2209 | ||||||||
Description | C2H2 family protein | ||||||||
Gene Model |
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Signature Domain? help Back to Top | |||||||
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No. | Domain | Score | E-value | Start | End | HMM Start | HMM End |
1 | zf-C2H2 | 17.4 | 1.2e-05 | 168 | 185 | 3 | 20 |
ETTTTEEESSHHHHHHHH CS zf-C2H2 3 CpdCgksFsrksnLkrHi 20 C+ C+ksF+r nL+ H+ RDX85784.1 168 CSVCSKSFNRYNNLQMHM 185 *****************9 PP | |||||||
2 | zf-C2H2 | 14.3 | 0.00012 | 250 | 272 | 1 | 23 |
EEETTTTEEESSHHHHHHHHHHT CS zf-C2H2 1 ykCpdCgksFsrksnLkrHirtH 23 y C +C+k F k + ++H +++ RDX85784.1 250 YMCRKCDKAFAVKGDWRTHEKNC 272 89*****************9987 PP |
Sequence ? help Back to Top |
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Protein Sequence Length: 326 aa Download sequence |
MTDPQSNLYG GTFNFMPLYS HHSSFTSQSN LFSPYPLAHS NNNTFSIQSE APPSPPLREA 60 LPLINNIKQK ENEPSNCGEG QKRDKDESLL TSTEDGDGGD ETVTVALRIG LPSVAASDLL 120 GSRKISACGE KGEVRTVISG HPLDRINKVQ YWIPTPSQIL IGPTQFLCSV CSKSFNRYNN 180 LQMHMWGHGS QYRKGPDSLK GTQPSAMLRL PCFCCAPGCK HNIDHPRARP LKDFRTLQTH 240 YKRKHGIKPY MCRKCDKAFA VKGDWRTHEK NCGKIWYCLC GSDFKHKRSL KDHIKAFGHG 300 HGAIDIDCMQ EDEGGSEIEH DGDSSM |
Best hit in Arabidopsis thaliana ? help Back to Top | ||||||
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Hit ID | E-value | Description | ||||
AT3G57670.1 | 1e-113 | C2H2 family protein |