PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

RDX84444.1

Organism

Mucuna pruriens

Taxonomic ID

157652

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Fabales; Fabaceae; Papilionoideae; 50 kb inversion clade; NPAAA clade; indigoferoid/millettioid clade; Phaseoleae; Mucuna

Family

C2H2

Protein Properties

Length: 397aa MW: 44161.1 Da PI: 8.9871

Description

C2H2 family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
RDX84444.1	genome	NCBI	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	zf-C2H2	11.4	0.00097	172	194	1	23
EEETTTTEEESSHHHHHHHHHHT CS zf-C2H2 1 ykCpdCgksFsrksnLkrHirtH 23 y+C+ C+++F++ L H +H RDX84444.1 172 YECKTCNRTFPSFQALGGHRASH 194 99**********99999998887 PP
2	zf-C2H2	12.8	0.00035	252	274	1	23
EEETTTTEEESSHHHHHHHHHHT CS zf-C2H2 1 ykCpdCgksFsrksnLkrHirtH 23 ++C++Cg F++ L H+r+H RDX84444.1 252 HECSICGAEFTSGQALGGHMRRH 274 78********************9 PP

Sequence ? help Back to Top
Protein Sequence Length: 397 aa Download sequence
MVPPSFGWGS FHFVKCVGKV KALVGGVRTN MEAPEDLSFG GSKDHANIVK GKRTKRVRPQ 60 SPVPFSITAN SSTGEGERQE DCYNGNDHNN NKNIDINNNN NSSPTTSSAG LQDSTDEEED 120 MANCLILLAQ GQSRETPKHA EEDGGMNYAK YSSRKFLEAA TLGSNRAGYY VYECKTCNRT 180 FPSFQALGGH RASHKKPKAI IAIGQEKRQQ HLLSSDEEEF QLKTNKSPFS LQLNNNNRGN 240 LYSSNNNKSK VHECSICGAE FTSGQALGGH MRRHRAPVGT PTTLSFTPLP LEPEEDHPRK 300 KRNVLNLDLD LNLPAPEDDQ RESKFVFASK QHGQKQQQQQ QQQKQQQQQT SLVFPAPALL 360 ISYSIHLSNP TKPNHLVLHD SQPSISPPNL RAWLRYS

Sequence ? help Back to Top

Protein Sequence Length: 397 aa Download sequence

MVPPSFGWGS FHFVKCVGKV KALVGGVRTN MEAPEDLSFG GSKDHANIVK GKRTKRVRPQ  60
SPVPFSITAN SSTGEGERQE DCYNGNDHNN NKNIDINNNN NSSPTTSSAG LQDSTDEEED  120
MANCLILLAQ GQSRETPKHA EEDGGMNYAK YSSRKFLEAA TLGSNRAGYY VYECKTCNRT  180
FPSFQALGGH RASHKKPKAI IAIGQEKRQQ HLLSSDEEEF QLKTNKSPFS LQLNNNNRGN  240
LYSSNNNKSK VHECSICGAE FTSGQALGGH MRRHRAPVGT PTTLSFTPLP LEPEEDHPRK  300
KRNVLNLDLD LNLPAPEDDQ RESKFVFASK QHGQKQQQQQ QQQKQQQQQT SLVFPAPALL  360
ISYSIHLSNP TKPNHLVLHD SQPSISPPNL RAWLRYS

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT5G04390.1	2e-55	C2H2 family protein