PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

RDX82544.1

Organism

Mucuna pruriens

Taxonomic ID

157652

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Fabales; Fabaceae; Papilionoideae; 50 kb inversion clade; NPAAA clade; indigoferoid/millettioid clade; Phaseoleae; Mucuna

Family

MYB

Protein Properties

Length: 568aa MW: 64012 Da PI: 7.9686

Description

MYB family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
RDX82544.1	genome	NCBI	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	Myb_DNA-binding	53.9	4e-17	78	125	1	48
TSSS-HHHHHHHHHHHHHTTTT-HHHHHHHHTTTS-HHHHHHHHHHHT CS Myb_DNA-binding 1 rgrWTteEdellvdavkqlGggtWktIartmgkgRtlkqcksrwqkyl 48 +g W++eEde+l++ ++++G g+W+++++ g+ R++k+c++rw +yl RDX82544.1 78 KGLWSPEEDEKLLRHITKYGHGCWSSVPKQAGLQRCGKSCRLRWINYL 125 678*******************************************97 PP
2	Myb_DNA-binding	46.1	1.2e-14	131	174	1	46
TSSS-HHHHHHHHHHHHHTTTT-HHHHHHHHTTTS-HHHHHHHHHH CS Myb_DNA-binding 1 rgrWTteEdellvdavkqlGggtWktIartmgkgRtlkqcksrwqk 46 rg +++eE+ l++++++ lG++ W+ Ia+ ++ gRt++++k+ w++ RDX82544.1 131 RGTFSQEEENLIIELHAVLGNR-WSQIAAQLP-GRTDNEIKNLWNS 174 899*****************.*****.*********97 PP

Sequence ? help Back to Top
Protein Sequence Length: 568 aa Download sequence
MTSLMGPRSY ISSTSSLSCQ FIFLPCYHII SLARCHILSI DLGHSNSFGS LTFLIGRINK 60 VKLQMGRHSC CYKQKLRKGL WSPEEDEKLL RHITKYGHGC WSSVPKQAGL QRCGKSCRLR 120 WINYLRPDLK RGTFSQEEEN LIIELHAVLG NRWSQIAAQL PGRTDNEIKN LWNSCLKKKL 180 RQKGIDPVTH KPLCEVENGE ENGRSQEKAA QVSNELNLLK SESSKSDSGS YEQRRSNSPK 240 AYAPEMDGSC SSKIESNFVT NNCYSKDLFL ERFMSSRQES YSTSCQPSDL MGNYPIQMSY 300 AAASTECLPN DSNSSHWFSQ TGRPFDMNSE FPFNASTPTT NLFLPNNSFC YKPSLAVPSD 360 NVSTAYGSHY WEATASNNSN SNSSIRSNSS TELRSSSPLN IFSSWGVADC STSTKEAQIH 420 MMENHAEEAK WDEYLHNPMS MLASVQNQAP ESLCNEMKTS MHLVPDTLGA ILPHAHTKQQ 480 EPSQTSTIFS KDIHKLRAAF GHMDRVTLPA NNFQNLFHPL PALTLSLYAS FGVDPFMQQH 540 DMSCHIKKEI DTTYTSFCRV KVEYGRIY

Sequence ? help Back to Top

Protein Sequence Length: 568 aa Download sequence

MTSLMGPRSY ISSTSSLSCQ FIFLPCYHII SLARCHILSI DLGHSNSFGS LTFLIGRINK  60
VKLQMGRHSC CYKQKLRKGL WSPEEDEKLL RHITKYGHGC WSSVPKQAGL QRCGKSCRLR  120
WINYLRPDLK RGTFSQEEEN LIIELHAVLG NRWSQIAAQL PGRTDNEIKN LWNSCLKKKL  180
RQKGIDPVTH KPLCEVENGE ENGRSQEKAA QVSNELNLLK SESSKSDSGS YEQRRSNSPK  240
AYAPEMDGSC SSKIESNFVT NNCYSKDLFL ERFMSSRQES YSTSCQPSDL MGNYPIQMSY  300
AAASTECLPN DSNSSHWFSQ TGRPFDMNSE FPFNASTPTT NLFLPNNSFC YKPSLAVPSD  360
NVSTAYGSHY WEATASNNSN SNSSIRSNSS TELRSSSPLN IFSSWGVADC STSTKEAQIH  420
MMENHAEEAK WDEYLHNPMS MLASVQNQAP ESLCNEMKTS MHLVPDTLGA ILPHAHTKQQ  480
EPSQTSTIFS KDIHKLRAAF GHMDRVTLPA NNFQNLFHPL PALTLSLYAS FGVDPFMQQH  540
DMSCHIKKEI DTTYTSFCRV KVEYGRIY

Nucleic Localization Signal ? help Back to Top

No.	Start	End	Sequence
1	176	182	LKKKLRQ

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT4G01680.3	4e-91	MYB family protein