PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

RDX81372.1

Organism

Mucuna pruriens

Taxonomic ID

157652

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Fabales; Fabaceae; Papilionoideae; 50 kb inversion clade; NPAAA clade; indigoferoid/millettioid clade; Phaseoleae; Mucuna

Family

MYB

Protein Properties

Length: 405aa MW: 45291.5 Da PI: 6.6616

Description

MYB family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
RDX81372.1	genome	NCBI	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	Myb_DNA-binding	54.6	2.6e-17	14	61	1	48
TSSS-HHHHHHHHHHHHHTTTT-HHHHHHHHTTTS-HHHHHHHHHHHT CS Myb_DNA-binding 1 rgrWTteEdellvdavkqlGggtWktIartmgkgRtlkqcksrwqkyl 48 +g W++eEde+l++ ++++G g+W+++++ g+ R++k+c++rw +yl RDX81372.1 14 KGLWSPEEDEKLLRHITKYGHGCWSSVPKQAGLQRCGKSCRLRWINYL 61 678*******************************************97 PP
2	Myb_DNA-binding	46.7	7.4e-15	67	110	1	46
TSSS-HHHHHHHHHHHHHTTTT-HHHHHHHHTTTS-HHHHHHHHHH CS Myb_DNA-binding 1 rgrWTteEdellvdavkqlGggtWktIartmgkgRtlkqcksrwqk 46 rg +++eE+ l++++++ lG++ W+ Ia+ ++ gRt++++k+ w++ RDX81372.1 67 RGTFSQEEENLIIELHAVLGNR-WSQIAAQLP-GRTDNEIKNLWNS 110 899*****************.*****.*********97 PP

Sequence ? help Back to Top
Protein Sequence Length: 405 aa Download sequence
MGRHSCCYKQ KLRKGLWSPE EDEKLLRHIT KYGHGCWSSV PKQAGLQRCG KSCRLRWINY 60 LRPDLKRGTF SQEEENLIIE LHAVLGNRWS QIAAQLPGRT DNEIKNLWNS CLKKKLRQRG 120 IDPVTHKPLS EVENGEEDKT RSQELSNELN LLNSESFKSD EGSYEQRASS IAPKAYEMEG 180 SCSSKINTKN DTNLIGNCSN KDLFLDSYTT SCQPSDLMGN YPLQITDNLP TNSNSCHWFS 240 PTARPFDMNS EFTSNDMSIL PPTTNSFLLT SFCYKPSLAV PSEDISAASF ALNGPNYWEA 300 SASNNSNGSN TSDGTGSREL TSSKNTVLSS WGLTEEAKWS EYLHNPMLML AAPESLCNQI 360 RPATHLVPDN TLGAILPDSK EQQHSQNSTF FSKDIQKLTA AFGHI

Sequence ? help Back to Top

Protein Sequence Length: 405 aa Download sequence

MGRHSCCYKQ KLRKGLWSPE EDEKLLRHIT KYGHGCWSSV PKQAGLQRCG KSCRLRWINY  60
LRPDLKRGTF SQEEENLIIE LHAVLGNRWS QIAAQLPGRT DNEIKNLWNS CLKKKLRQRG  120
IDPVTHKPLS EVENGEEDKT RSQELSNELN LLNSESFKSD EGSYEQRASS IAPKAYEMEG  180
SCSSKINTKN DTNLIGNCSN KDLFLDSYTT SCQPSDLMGN YPLQITDNLP TNSNSCHWFS  240
PTARPFDMNS EFTSNDMSIL PPTTNSFLLT SFCYKPSLAV PSEDISAASF ALNGPNYWEA  300
SASNNSNGSN TSDGTGSREL TSSKNTVLSS WGLTEEAKWS EYLHNPMLML AAPESLCNQI  360
RPATHLVPDN TLGAILPDSK EQQHSQNSTF FSKDIQKLTA AFGHI

Nucleic Localization Signal ? help Back to Top

No.	Start	End	Sequence
1	112	118	LKKKLRQ

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT4G01680.3	1e-95	MYB family protein