PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
|
Home TFext BLAST Prediction Download Help About Links PlantRegMap |
Transcription Factor Information
Basic Information? help Back to Top | |||||||||
---|---|---|---|---|---|---|---|---|---|
TF ID | RDX78405.1 | ||||||||
Organism | |||||||||
Taxonomic ID | |||||||||
Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Fabales; Fabaceae; Papilionoideae; 50 kb inversion clade; NPAAA clade; indigoferoid/millettioid clade; Phaseoleae; Mucuna
|
||||||||
Family | ERF | ||||||||
Protein Properties | Length: 190aa MW: 20936.5 Da PI: 8.6449 | ||||||||
Description | ERF family protein | ||||||||
Gene Model |
|
Signature Domain? help Back to Top | |||||||
---|---|---|---|---|---|---|---|
No. | Domain | Score | E-value | Start | End | HMM Start | HMM End |
1 | AP2 | 56.9 | 5.2e-18 | 5 | 52 | 1 | 52 |
AP2 1 sgykGVrwdkkrgrWvAeIrdpsengkr..krfslgkfgtaeeAakaaiaarkk 52 ++++GVr++ +g+Wv+eIr+p +r++lg+f tae Aa+a+++a+ RDX78405.1 5 KKFRGVRQRQ-WGSWVSEIRHP-----LlkRRVWLGTFETAEAAARAYDQAAIL 52 59*****999.**********8.....334*********************975 PP |
Sequence ? help Back to Top |
---|
Protein Sequence Length: 190 aa Download sequence |
MVQAKKFRGV RQRQWGSWVS EIRHPLLKRR VWLGTFETAE AAARAYDQAA ILISGQNAKT 60 NFPTPMNQPQ GAATATTPCV DPFSSPNVLS EHLVRKLKRS CKDSSPSLTC LRLDADNSHI 120 GVWQKGAGPH SDSNWIIRVE LGKKHGEGDS GVSSAGSPPK TCGDFDGDEE NRIAMQMIDE 180 LLNWNYPYGS |
Best hit in Arabidopsis thaliana ? help Back to Top | ||||||
---|---|---|---|---|---|---|
Hit ID | E-value | Description | ||||
AT5G11190.1 | 1e-60 | ERF family protein |