PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
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Home TFext BLAST Prediction Download Help About Links PlantRegMap |
Transcription Factor Information
Basic Information? help Back to Top | |||||||||
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TF ID | RDX70089.1 | ||||||||
Organism | |||||||||
Taxonomic ID | |||||||||
Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Fabales; Fabaceae; Papilionoideae; 50 kb inversion clade; NPAAA clade; indigoferoid/millettioid clade; Phaseoleae; Mucuna
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Family | NAC | ||||||||
Protein Properties | Length: 244aa MW: 27671.1 Da PI: 9.2232 | ||||||||
Description | NAC family protein | ||||||||
Gene Model |
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Signature Domain? help Back to Top | |||||||
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No. | Domain | Score | E-value | Start | End | HMM Start | HMM End |
1 | NAM | 172.9 | 9.7e-54 | 32 | 159 | 1 | 128 |
NAM 1 lppGfrFhPtdeelvveyLkkkvegkkleleevikevdiykvePwdLp..kkvkaeekewyfFskrdkkyatgkrknratksgyWkatgkdkevlskkg 97 l+pGfrFhPtdeelv +yLk+kv+gk +++ ++i+evdiy++ePwdL +++k++++ewyfFs dkky +g r nrat++gyWkatg+d++v + ++ RDX70089.1 32 LAPGFRFHPTDEELVIYYLKRKVSGKAFRF-DAISEVDIYRSEPWDLAdkSRLKTRDQEWYFFSALDKKYGNGGRMNRATSKGYWKATGNDRPVRH-EQ 128 579*************************99.99**************75348899999**************************************.99 PP NAM 98 elvglkktLvfykgrapkgektdWvmheyrl 128 ++vglkktLvf++grap+g++t+Wvmheyrl RDX70089.1 129 RTVGLKKTLVFHSGRAPDGKRTNWVMHEYRL 159 9****************************98 PP |
Sequence ? help Back to Top |
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Protein Sequence Length: 244 aa Download sequence |
MGRETMFLPA PPTTATTTVN PVAAPTAPPT SLAPGFRFHP TDEELVIYYL KRKVSGKAFR 60 FDAISEVDIY RSEPWDLADK SRLKTRDQEW YFFSALDKKY GNGGRMNRAT SKGYWKATGN 120 DRPVRHEQRT VGLKKTLVFH SGRAPDGKRT NWVMHEYRLM DEELERAGTG SSQPQDAYVL 180 CRVFHKNNIG PPNGQRYAPF IEEEWDDATG MVPGAEPVDN GSYRPRVEGN RGVLCAERRN 240 DVVQ |
Best hit in Arabidopsis thaliana ? help Back to Top | ||||||
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Hit ID | E-value | Description | ||||
AT3G10480.1 | 1e-102 | NAC family protein |