PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
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Home TFext BLAST Prediction Download Help About Links PlantRegMap |
Transcription Factor Information
Basic Information? help Back to Top | |||||||||
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TF ID | RDX69968.1 | ||||||||
Organism | |||||||||
Taxonomic ID | |||||||||
Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Fabales; Fabaceae; Papilionoideae; 50 kb inversion clade; NPAAA clade; indigoferoid/millettioid clade; Phaseoleae; Mucuna
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Family | ERF | ||||||||
Protein Properties | Length: 290aa MW: 32639.2 Da PI: 5.5238 | ||||||||
Description | ERF family protein | ||||||||
Gene Model |
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Signature Domain? help Back to Top | |||||||
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No. | Domain | Score | E-value | Start | End | HMM Start | HMM End |
1 | AP2 | 60.2 | 5e-19 | 75 | 123 | 3 | 55 |
AP2 3 ykGVrwdkkrgrWvAeIrdpsengkrkrfslgkfgtaeeAakaaiaarkkleg 55 y+G+r+++ +g+W+AeIrdp++ r++lg+f taeeAa+a+++ ++k++g RDX69968.1 75 YRGIRQRP-WGKWAAEIRDPRK---GVRVWLGTFNTAEEAARAYDREARKIRG 123 9*******.**********954...4************************998 PP |
Sequence ? help Back to Top |
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Protein Sequence Length: 290 aa Download sequence |
MCGGAIIADF IPRRGGRPLT ASELWPNSFG KDDDFDFDYS HIGNQQQPST LKRSQPPKAS 60 EQVEKPGKRQ RKNLYRGIRQ RPWGKWAAEI RDPRKGVRVW LGTFNTAEEA ARAYDREARK 120 IRGKKAKVNF PNEDDEYSIR TRNPIPPQNP PLLHQQYRCN VNNAPKNLSF EFGYDLNLAG 180 AFPSHVDAVA VSGDENSGLA SGSEGAYSTT EFVGSDQNGN CYLGGAVMVK EKETGVVEPE 240 EEKNKVQELS EELMAYENYM KFYQIPYYDG QSTPPSVVQE SLVGDLWSFE |
Best hit in Arabidopsis thaliana ? help Back to Top | ||||||
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Hit ID | E-value | Description | ||||
AT3G16770.1 | 2e-37 | ERF family protein |