PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
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Home TFext BLAST Prediction Download Help About Links PlantRegMap |
Transcription Factor Information
Basic Information? help Back to Top | |||||||||
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TF ID | RDX68671.1 | ||||||||
Organism | |||||||||
Taxonomic ID | |||||||||
Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Fabales; Fabaceae; Papilionoideae; 50 kb inversion clade; NPAAA clade; indigoferoid/millettioid clade; Phaseoleae; Mucuna
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Family | ERF | ||||||||
Protein Properties | Length: 261aa MW: 29603.8 Da PI: 8.1879 | ||||||||
Description | ERF family protein | ||||||||
Gene Model |
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Signature Domain? help Back to Top | |||||||
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No. | Domain | Score | E-value | Start | End | HMM Start | HMM End |
1 | AP2 | 59.4 | 8.4e-19 | 128 | 177 | 3 | 55 |
AP2 3 ykGVrwdkkrgrWvAeIrdpsengkrkrfslgkfgtaeeAakaaiaarkkleg 55 y+GVr+++ +g+++AeIrd + ng r++lg+f tae Aa a+++a+++++g RDX68671.1 128 YRGVRRRP-WGKFAAEIRDSTRNG--VRVWLGTFETAEAAALAYDQAALAMRG 177 9*******.**********44465..*************************98 PP |
Sequence ? help Back to Top |
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Protein Sequence Length: 261 aa Download sequence |
MRLRVVWPPS PQVPLTHVPP INLFFKLGPT NHHMFQKFSA PASGNSNAFI FKTYLPLHYS 60 VFKSSISFPS LYKTEMSSSF FSGDLNYEVP YQYSLPFNEN DSEEMLLYQV LAQGGGENSL 120 ETTTTVSYRG VRRRPWGKFA AEIRDSTRNG VRVWLGTFET AEAAALAYDQ AALAMRGSMA 180 VLNFPAEVVR QSLRNMECGF EEGCSPVLEL KKRHSMKRKL ESKKVKNKSQ NVMVFQDLGA 240 DYLEQLLTLS QDMDMDMDAS Y |
Best hit in Arabidopsis thaliana ? help Back to Top | ||||||
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Hit ID | E-value | Description | ||||
AT3G23240.1 | 8e-56 | ERF family protein |