PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
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Home TFext BLAST Prediction Download Help About Links PlantRegMap |
Transcription Factor Information
Basic Information? help Back to Top | |||||||||
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TF ID | RDX65026.1 | ||||||||
Organism | |||||||||
Taxonomic ID | |||||||||
Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Fabales; Fabaceae; Papilionoideae; 50 kb inversion clade; NPAAA clade; indigoferoid/millettioid clade; Phaseoleae; Mucuna
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Family | Dof | ||||||||
Protein Properties | Length: 235aa MW: 24617.2 Da PI: 8.2866 | ||||||||
Description | Dof family protein | ||||||||
Gene Model |
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Signature Domain? help Back to Top | |||||||
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No. | Domain | Score | E-value | Start | End | HMM Start | HMM End |
1 | zf-Dof | 121.6 | 2.8e-38 | 26 | 86 | 2 | 62 |
zf-Dof 2 kekalkcprCdstntkfCyynnyslsqPryfCkaCrryWtkGGalrnvPvGggrrknkkss 62 ++++l+cprCdstntkfCyynny+ sqPr+fCk+CrryWt+GG+lr++PvGgg+rkn k+s RDX65026.1 26 EQENLPCPRCDSTNTKFCYYNNYNYSQPRHFCKSCRRYWTHGGTLRDIPVGGGSRKNAKRS 86 57899****************************************************9876 PP |
Sequence ? help Back to Top |
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Protein Sequence Length: 235 aa Download sequence |
MPSSNSGESR RATKPQTSAG APPPPEQENL PCPRCDSTNT KFCYYNNYNY SQPRHFCKSC 60 RRYWTHGGTL RDIPVGGGSR KNAKRSRTHH TATSSSSSTM TSAQEHALPA LTPVAATQGG 120 SMQFVDGDVK QNVNVCGSFT SLLNNTQGSG FLALGGFGLG LGHGFEDMGF GIGRTGWAFP 180 GMVDSGNIGG AVAGSGVNTW QLEGADGGFV SGDCFSWPGL AISTPGNDLA YFTGK |
Best hit in Arabidopsis thaliana ? help Back to Top | ||||||
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Hit ID | E-value | Description | ||||
AT3G50410.1 | 4e-51 | Dof family protein |