PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

RDX60228.1

Organism

Mucuna pruriens

Taxonomic ID

157652

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Fabales; Fabaceae; Papilionoideae; 50 kb inversion clade; NPAAA clade; indigoferoid/millettioid clade; Phaseoleae; Mucuna

Family

AP2

Protein Properties

Length: 629aa MW: 70699.7 Da PI: 6.8212

Description

AP2 family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
RDX60228.1	genome	NCBI	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	AP2	38	4e-12	276	332	1	55
AP2 1 sgykGVrwdkkrgrWvAeIrd.pse.ng.krkrfslgkfgtaeeAakaaiaarkkleg 55 s+y+GV++++++gr++A+++d ++ g rk + g ++ +e+Aa+a++ a++k++g RDX60228.1 276 SQYRGVTRHRWTGRYEAHLWDnSCKkEGqGRKGRQ-GGYDMEEKAARAYDMAALKYWG 332 78*****************87776554446655.77****************98 PP
2	AP2	32.3	2.6e-10	398	441	9	55
AP2 9 dkkrgrWvAeIrdpsengkrkrfslgkfgtaeeAakaaiaarkkleg 55 +++ grW A+I + +k +lg+f t eeAa+a++ a+ k++g RDX60228.1 398 HHQHGRWQARIGRVAG---NKDLYLGTFSTQEEAAEAYDIAAIKFRG 441 5678****988532...5**********************998 PP

Sequence ? help Back to Top
Protein Sequence Length: 629 aa Download sequence
MKPIENGDAI NINYQNSWLG FSLSPQMNIG LVPSHPHQTQ PSSSAAETVP PSFYHHTPLH 60 NYGLYYGLEG SEHVGMYSSL PIVPLKSNAS PYGIEALSRS QAQAMATTSA MHLSLDSMFY 120 NQLLCHGPNN PNNLNHVQEN INQQQLSYYS TLRNHDVILE GSKHQLPNIA EGEIPGLKSW 180 FSREFPASHA QESRMIVPVE HNGGKSESIG SMPYGDLHSW NLSVSPTSQS SCVTSSSALT 240 DTVATDTKKR RLEMLDQNQK QIVHRKSIDT FGQRTSQYRG VTRHRWTGRY EAHLWDNSCK 300 KEGQGRKGRQ GGYDMEEKAA RAYDMAALKY WGPSSHINFP LENYQNELEE MKNMTRQEFV 360 AHLRSEQLIH IHNHDIQLLS KSGKAADSQE GPLCTEEHHQ HGRWQARIGR VAGNKDLYLG 420 TFSTQEEAAE AYDIAAIKFR GLNAVTNFDI TRYDVEKIMA SSNLLSSEQA KRNREMNVGT 480 RNEAIVNQQY EHTKESVLMQ KSCKSQSEWK MVLYPSSQQL DQNPPRIESC RTQSFSMALD 540 NIFHQQVEES SNMGTHLSNP SSLVTSLSSS REESPDKTSF PMLFGMPSTA SKLLANIPTS 600 NVDSWDLSSN LRPTLSLPQM PFFAAWTDA

Sequence ? help Back to Top

Protein Sequence Length: 629 aa Download sequence

MKPIENGDAI NINYQNSWLG FSLSPQMNIG LVPSHPHQTQ PSSSAAETVP PSFYHHTPLH  60
NYGLYYGLEG SEHVGMYSSL PIVPLKSNAS PYGIEALSRS QAQAMATTSA MHLSLDSMFY  120
NQLLCHGPNN PNNLNHVQEN INQQQLSYYS TLRNHDVILE GSKHQLPNIA EGEIPGLKSW  180
FSREFPASHA QESRMIVPVE HNGGKSESIG SMPYGDLHSW NLSVSPTSQS SCVTSSSALT  240
DTVATDTKKR RLEMLDQNQK QIVHRKSIDT FGQRTSQYRG VTRHRWTGRY EAHLWDNSCK  300
KEGQGRKGRQ GGYDMEEKAA RAYDMAALKY WGPSSHINFP LENYQNELEE MKNMTRQEFV  360
AHLRSEQLIH IHNHDIQLLS KSGKAADSQE GPLCTEEHHQ HGRWQARIGR VAGNKDLYLG  420
TFSTQEEAAE AYDIAAIKFR GLNAVTNFDI TRYDVEKIMA SSNLLSSEQA KRNREMNVGT  480
RNEAIVNQQY EHTKESVLMQ KSCKSQSEWK MVLYPSSQQL DQNPPRIESC RTQSFSMALD  540
NIFHQQVEES SNMGTHLSNP SSLVTSLSSS REESPDKTSF PMLFGMPSTA SKLLANIPTS  600
NVDSWDLSSN LRPTLSLPQM PFFAAWTDA

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT4G37750.1	2e-94	AP2 family protein