PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

Pd.00g968920.m01

Organism

Prunus domestica

Taxonomic ID

3758

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Rosales; Rosaceae; Amygdaloideae; Amygdaleae; Prunus

Family

AP2

Protein Properties

Length: 402aa MW: 45256.9 Da PI: 6.8081

Description

AP2 family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
Pd.00g968920.m01	genome	GDR	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	AP2	35.5	2.5e-11	70	126	1	55
AP2 1 sgykGVrwdkkrgrWvAeIrd.pseng..krkrfslgkfgtaeeAakaaiaarkkleg 55 s+++GV++++++gr++A+++d s+n k+k + g ++ +e Aa+a++ a++k++g Pd.00g968920.m01 70 SRFRGVSRHRWTGRFEAHLWDkLSWNVtqKKKGKQ-GAYDEEESAARAYDLAALKYWG 126 789****************88887784446666.9*****************98 PP
2	AP2	52.3	1.4e-16	169	220	1	55
AP2 1 sgykGVrwdkkrgrWvAeIrd.psengkrkrfslgkfgtaeeAakaaiaarkkleg 55 s+y+GV +++ +grW+A+I + g +k+ +lg++ t eeAa+a++ a+ +++g Pd.00g968920.m01 169 SKYRGVARHHHNGRWEARIGRvF---G-NKYLYLGTYSTQEEAARAYDIAAIEYRG 220 89**99******99966...3.6***********************97 PP

Sequence ? help Back to Top
Protein Sequence Length: 402 aa Download sequence
MELMMVKNEE NPGRRRLSTA DRETEATRSV KRRRRDPPAV AVSCDNKQSE QQLPQKPADP 60 TSATTMKRSS RFRGVSRHRW TGRFEAHLWD KLSWNVTQKK KGKQGAYDEE ESAARAYDLA 120 ALKYWGTSTF TNFPISDYEK EIEIMQSVSK EEYLASLRRK SSGFSRGVSK YRGVARHHHN 180 GRWEARIGRV FGNKYLYLGT YSTQEEAARA YDIAAIEYRG INAVTNFDLS SYIRWLKTTA 240 DDPIATQEPE TVAEPQNKPF MANSYISTEE PFSHTNPFAS DYFTSPLKQE VIGSNIPLNT 300 DSKSSSPTAL GLLLQSSIFR ELVQKNSNFS EDESTDGGET KNQPQVGSDD EFGGIFYDGI 360 GNNPFDCSSN SDGDNSWSSI TSTTLLNQPT KANASDSLFF FS

Sequence ? help Back to Top

Protein Sequence Length: 402 aa Download sequence

MELMMVKNEE NPGRRRLSTA DRETEATRSV KRRRRDPPAV AVSCDNKQSE QQLPQKPADP  60
TSATTMKRSS RFRGVSRHRW TGRFEAHLWD KLSWNVTQKK KGKQGAYDEE ESAARAYDLA  120
ALKYWGTSTF TNFPISDYEK EIEIMQSVSK EEYLASLRRK SSGFSRGVSK YRGVARHHHN  180
GRWEARIGRV FGNKYLYLGT YSTQEEAARA YDIAAIEYRG INAVTNFDLS SYIRWLKTTA  240
DDPIATQEPE TVAEPQNKPF MANSYISTEE PFSHTNPFAS DYFTSPLKQE VIGSNIPLNT  300
DSKSSSPTAL GLLLQSSIFR ELVQKNSNFS EDESTDGGET KNQPQVGSDD EFGGIFYDGI  360
GNNPFDCSSN SDGDNSWSSI TSTTLLNQPT KANASDSLFF FS

Nucleic Localization Signal ? help Back to Top

No.	Start	End	Sequence
1	14	35	RRRLSTADRETEATRSVKRRRR

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT3G54320.3	1e-91	AP2 family protein