PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
|
Home TFext BLAST Prediction Download Help About Links PlantRegMap |
Transcription Factor Information
Basic Information? help Back to Top | |||||||||
---|---|---|---|---|---|---|---|---|---|
TF ID | Pd.00g951210.m01 | ||||||||
Organism | |||||||||
Taxonomic ID | |||||||||
Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Rosales; Rosaceae; Amygdaloideae; Amygdaleae; Prunus
|
||||||||
Family | B3 | ||||||||
Protein Properties | Length: 268aa MW: 29946.9 Da PI: 10.4359 | ||||||||
Description | B3 family protein | ||||||||
Gene Model |
|
Signature Domain? help Back to Top | |||||||
---|---|---|---|---|---|---|---|
No. | Domain | Score | E-value | Start | End | HMM Start | HMM End |
1 | B3 | 38.2 | 2.6e-12 | 162 | 243 | 15 | 98 |
-EE--HHH.HTT---..--SEEEEEETTS-EEEEEE....EEETTEEEE-TTHHHHHHHHT--TT-EEEEEE-SSSEE..EEEEE- CS B3 15 rlvlpkkfaeehggkkeesktltledesgrsWevkliy..rkksgryvltkGWkeFvkangLkegDfvvFkldgrsefelvvkvfr 98 +++pk+ a + g+ + +k ++++d++grsW vkl++ + +s+r+ +++G + ++an++ gD+ +F++++ s + v++fr Pd.00g951210.m01 162 GVSIPKEVAVTEGLLS--KKSMMIQDPTGRSWPVKLRVrgKLSSCRVNMSTGLLDCCNANQIIPGDTAIFEFVKPSLA--QVHIFR 243 489*****99998884..4569**************996666777799***********************9885555..888887 PP |
Sequence ? help Back to Top |
---|
Protein Sequence Length: 268 aa Download sequence |
MARKLLKPSL NKQSFFKILL GDFSQRLRIP PKFVKNFNDH HLEDGDCLVF KYDGESKFKV 60 TIYDRTACEK NVKVAERSGC PVSLANKGKA QVKEEIVDRE TRNYNKNCQN KAIVSGRRSG 120 NYVIPGRRPA NDHVGATSTE PVLFKPKYSC FIITFTRKLR YGVSIPKEVA VTEGLLSKKS 180 MMIQDPTGRS WPVKLRVRGK LSSCRVNMST GLLDCCNANQ IIPGDTAIFE FVKPSLAQVH 240 IFRVGGNSVV LAAPDVKGVL FLGCRSIF |
Best hit in Arabidopsis thaliana ? help Back to Top | ||||||
---|---|---|---|---|---|---|
Hit ID | E-value | Description | ||||
AT5G66980.1 | 2e-12 | B3 family protein |