PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
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Home TFext BLAST Prediction Download Help About Links PlantRegMap |
Transcription Factor Information
Basic Information? help Back to Top | |||||||||
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TF ID | Pd.00g861370.m01 | ||||||||
Organism | |||||||||
Taxonomic ID | |||||||||
Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Rosales; Rosaceae; Amygdaloideae; Amygdaleae; Prunus
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Family | AP2 | ||||||||
Protein Properties | Length: 200aa MW: 23564.1 Da PI: 10.7105 | ||||||||
Description | AP2 family protein | ||||||||
Gene Model |
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Signature Domain? help Back to Top | |||||||
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No. | Domain | Score | E-value | Start | End | HMM Start | HMM End |
1 | AP2 | 52.6 | 1.1e-16 | 101 | 160 | 1 | 55 |
AP2 1 sgykGVrwdkkrgrWvAeIrd.pse.ng..kr.krfslgkfgtaeeAakaaiaarkkleg 55 s+y+GV++++++gr++A+++d ++ g ++ ++++lg ++ +e+Aa+a++ a++k++g Pd.00g861370.m01 101 SQYRGVTRHRWTGRYEAHLWDnSCKkEGqtRKgRQVYLGGYDMEEKAARAYDLAALKYWG 160 78*******************988886678446*************************98 PP |
Sequence ? help Back to Top |
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Protein Sequence Length: 200 aa Download sequence |
MVQQAWRWWQ SWLGLRWAQK EGMWCFRISM DLPRLSMMVK LSSNRLSWRT LWRMLEDHVE 60 NVGVKLVRQA GAKTKKRGGG KLSQKQPVHR KSIDTFGQRT SQYRGVTRHR WTGRYEAHLW 120 DNSCKKEGQT RKGRQVYLGG YDMEEKAARA YDLAALKYWG SATHINFPLE NYTAQLEEMM 180 NMSRQEYVAH MRSGISLCGN |
Best hit in Arabidopsis thaliana ? help Back to Top | ||||||
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Hit ID | E-value | Description | ||||
AT4G37750.1 | 7e-64 | AP2 family protein |