PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID Pd.00g853660.m01
Organism
Prunus domestica
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Rosales; Rosaceae; Amygdaloideae; Amygdaleae; Prunus
Family LFY
Protein Properties Length: 407aa    MW: 45176.7 Da    PI: 8.3509
Description LFY family protein
Gene Model
Gene Model ID Type Source Coding Sequence
Pd.00g853660.m01genomeGDRView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1FLO_LFY625.96.8e-19113931386
           FLO_LFY   1 mdpeafsaslfkwdpraaaaapparlleeaavseap.leaaaaaaarklr...eleelfkayGvryltvakiaelGftvstLvdmkdeelddl 89 
                       mdp+afsaslfkwd r + ++p+ r++ eaav+++  ++aaa aa r+ r   +le+lf+ayGvry+t+akiaelGftv+tL+dm+d eldd+
  Pd.00g853660.m01   1 MDPDAFSASLFKWDLRGMLVPPS-RAQLEAAVTPQGaAAAAAYAAVRSPRelgGLEDLFQAYGVRYYTAAKIAELGFTVNTLLDMRDGELDDM 92 
                       9**************99887666.555555554444133333333333334559*************************************** PP

           FLO_LFY  90 mkslseifrldllvGeryGikaavraerrrleeeeaekkrrkllsedeet...aldalsqeglseepvqeekeaagsggeglgeaelvaaeek 179
                       m+sls+ifr+dllvGeryGikaavraerrrl++ +  ++rr+++s d++t   aldalsqeglseepvq+eke++gsgg+ + eae++a +++
  Pd.00g853660.m01  93 MSSLSQIFRWDLLVGERYGIKAAVRAERRRLDDVD--SRRRHTVSGDTTTttnALDALSQEGLSEEPVQQEKEMVGSGGGAAWEAEAAAGAKR 183
                       *********************************87..88888997776554559***********************9999555555544432 PP

           FLO_LFY 180 kseeekkkaskkkqkrkkkkelkse........ededeeeeededeegsgedge...erqrehPfivtepgevargkknGLDYLfdLyeqCre 261
                       k++++++     k + ++ + +            d+d    +d +++g+g++g    er+rehPfivtepgevargkknGLDYLf+LyeqCr+
  Pd.00g853660.m01 184 KKQRRTR-----KGQYRNFNGIGGGhtndhnegVDNDI---DDMNRHGNGAGGGlltERRREHPFIVTEPGEVARGKKNGLDYLFHLYEQCRD 268
                       2222222.....22222222222212222211133333...3333334444443455************************************ PP

           FLO_LFY 262 fLlqvqkiakerGekcPtkvtnqvfryakkagasyinkPkmrhYvhCYalhcLdeeasnalrrafkergenvGawrqacykplvaiaarqgwd 354
                       fL+qvq+iakerGekcPtkvtnqvfr+akkagasyinkPkmrhYvhCYalhcLdeeasnalrr fkergenvGawr+acykplvaiaa qgw+
  Pd.00g853660.m01 269 FLIQVQNIAKERGEKCPTKVTNQVFRFAKKAGASYINKPKMRHYVHCYALHCLDEEASNALRRVFKERGENVGAWREACYKPLVAIAAGQGWE 361
                       ********************************************************************************************* PP

           FLO_LFY 355 idavfnahprLsiWYvPtkLrqLChlerskas 386
                       ida+fn+hprLsiWYvPtkLrqLCh+er++a+
  Pd.00g853660.m01 362 IDAIFNSHPRLSIWYVPTKLRQLCHTERNNAT 393
                       *****************************986 PP
Sequence ? help Back to Top
Protein Sequence    Length: 407 aa     Download sequence    
MDPDAFSASL FKWDLRGMLV PPSRAQLEAA VTPQGAAAAA AYAAVRSPRE LGGLEDLFQA  60
YGVRYYTAAK IAELGFTVNT LLDMRDGELD DMMSSLSQIF RWDLLVGERY GIKAAVRAER  120
RRLDDVDSRR RHTVSGDTTT TTNALDALSQ EGLSEEPVQQ EKEMVGSGGG AAWEAEAAAG  180
AKRKKQRRTR KGQYRNFNGI GGGHTNDHNE GVDNDIDDMN RHGNGAGGGL LTERRREHPF  240
IVTEPGEVAR GKKNGLDYLF HLYEQCRDFL IQVQNIAKER GEKCPTKVTN QVFRFAKKAG  300
ASYINKPKMR HYVHCYALHC LDEEASNALR RVFKERGENV GAWREACYKP LVAIAAGQGW  360
EIDAIFNSHP RLSIWYVPTK LRQLCHTERN NATASSSASG GGDHLPY
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT5G61850.11e-153LFY family protein