PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

Pd.00g849370.m01

Organism

Prunus domestica

Taxonomic ID

3758

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Rosales; Rosaceae; Amygdaloideae; Amygdaleae; Prunus

Family

AP2

Protein Properties

Length: 378aa MW: 42838.6 Da PI: 6.6831

Description

AP2 family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
Pd.00g849370.m01	genome	GDR	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	AP2	48.9	1.7e-15	74	133	1	55
AP2 1 sgykGVrwdkkrgrWvAeIrd.pseng...kr.krfslgkfgtaeeAakaaiaarkkleg 55 s y+GV++++++gr++A+++d s+n+ k+ ++++lg ++++e Aa ++ a++k++g Pd.00g849370.m01 74 SIYRGVTRHRWTGRFEAHLWDkSSWNNiqnKKgRQVYLGAYDSEEAAAHTYDLAALKYWG 133 57*****************777799977447***********************98 PP
2	AP2	52.9	9.2e-17	176	228	1	56
AP2 1 sgykGVrwdkkrgrWvAeIrd.psengkrkrfslgkfgtaeeAakaaiaarkklege 56 s+y+GV +++ +grW+A+I + g +k+ +lg++ t eeAa+a+++a+ +++g+ Pd.00g849370.m01 176 SKYRGVARHHHNGRWEARIGRvF---G-NKYLYLGTYNTQEEAAAAYDRAAIEYRGA 228 89**99******99966...3.6***********************995 PP

Sequence ? help Back to Top
Protein Sequence Length: 378 aa Download sequence
MTPPMGLMDV LELSLRSRGS KGLRAYRTWP ETPHLNQAEN QKPKAKRIRK NQNNPTEKCQ 60 NGTNPNTGGG RRSSIYRGVT RHRWTGRFEA HLWDKSSWNN IQNKKGRQVY LGAYDSEEAA 120 AHTYDLAALK YWGPGTTLNF PIETYTKELE EMQKASREEY LASLRRRSSG FSRGVSKYRG 180 VARHHHNGRW EARIGRVFGN KYLYLGTYNT QEEAAAAYDR AAIEYRGANA VTNFDINNYI 240 DKFKKESEET PPKCFDAGLP EDEKYPHLLH CIESNTMDQV MDAADEHKFT WNFLDTGLMA 300 QLPVPDIPLD NKPLELPDFF EDLRFEENFD LIFGAAGDAD LGGLMESAGC GVEEGVPRNL 360 EDNRSSSSPS STTTSVSF

Sequence ? help Back to Top

Protein Sequence Length: 378 aa Download sequence

MTPPMGLMDV LELSLRSRGS KGLRAYRTWP ETPHLNQAEN QKPKAKRIRK NQNNPTEKCQ  60
NGTNPNTGGG RRSSIYRGVT RHRWTGRFEA HLWDKSSWNN IQNKKGRQVY LGAYDSEEAA  120
AHTYDLAALK YWGPGTTLNF PIETYTKELE EMQKASREEY LASLRRRSSG FSRGVSKYRG  180
VARHHHNGRW EARIGRVFGN KYLYLGTYNT QEEAAAAYDR AAIEYRGANA VTNFDINNYI  240
DKFKKESEET PPKCFDAGLP EDEKYPHLLH CIESNTMDQV MDAADEHKFT WNFLDTGLMA  300
QLPVPDIPLD NKPLELPDFF EDLRFEENFD LIFGAAGDAD LGGLMESAGC GVEEGVPRNL  360
EDNRSSSSPS STTTSVSF

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT3G54320.3	3e-93	AP2 family protein