PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
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Transcription Factor Information
Basic Information? help Back to Top | |||||||||
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TF ID | Pd.00g780530.m01 | ||||||||
Organism | |||||||||
Taxonomic ID | |||||||||
Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Rosales; Rosaceae; Amygdaloideae; Amygdaleae; Prunus
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Family | MIKC_MADS | ||||||||
Protein Properties | Length: 247aa MW: 28304.5 Da PI: 8.9712 | ||||||||
Description | MIKC_MADS family protein | ||||||||
Gene Model |
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Signature Domain? help Back to Top | |||||||
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No. | Domain | Score | E-value | Start | End | HMM Start | HMM End |
1 | SRF-TF | 93.6 | 9.3e-30 | 9 | 59 | 1 | 51 |
S---SHHHHHHHHHHHHHHHHHHHHHHHHHHT-EEEEEEE-TTSEEEEEE- CS SRF-TF 1 krienksnrqvtfskRrngilKKAeELSvLCdaevaviifsstgklyeyss 51 krienk+ rqvtfskRr+g+lKKA+E+SvLCda+va+i+fs++gkl+eyss Pd.00g780530.m01 9 KRIENKISRQVTFSKRRAGLLKKAHEISVLCDADVALIVFSTKGKLFEYSS 59 79***********************************************96 PP | |||||||
2 | K-box | 94.6 | 1.6e-31 | 78 | 174 | 4 | 100 |
K-box 4 ssgksleeakaeslqqelakLkkeienLqreqRhllGedLesLslkeLqqLeqqLekslkkiRskKnellleqieelqkkekelqeenkaLrk 96 ++ + +e + + ++ e+ kL ++ie Lqr++Rh+ GedL+sLsl+eLq+Le qLe++lk+iR++Kn+l++e+i+el kk+k+lqe+n++L k Pd.00g780530.m01 78 QQLTTDSEPQGSCWSLEYPKLAARIEVLQRKLRHFTGEDLDSLSLRELQNLELQLETALKRIRTRKNQLMHESISELHKKQKALQEQNNSLGK 170 5556678888999******************************************************************************** PP K-box 97 klee 100 kl+e Pd.00g780530.m01 171 KLKE 174 *986 PP |
Sequence ? help Back to Top |
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Protein Sequence Length: 247 aa Download sequence |
MGRGKVQLKR IENKISRQVT FSKRRAGLLK KAHEISVLCD ADVALIVFST KGKLFEYSSD 60 SSMESILGRY DQYSHAEQQL TTDSEPQGSC WSLEYPKLAA RIEVLQRKLR HFTGEDLDSL 120 SLRELQNLEL QLETALKRIR TRKNQLMHES ISELHKKQKA LQEQNNSLGK KLKENENMLE 180 VEHDGQVQQV EQHRMGESRQ EEGWKMVMIM TEEVKLGRLL LLTHSCQCGC IAISTNNGLA 240 GRQAILK |
Best hit in Arabidopsis thaliana ? help Back to Top | ||||||
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Hit ID | E-value | Description | ||||
AT1G69120.1 | 8e-77 | MIKC_MADS family protein |