PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
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Transcription Factor Information
Basic Information? help Back to Top | |||||||||
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TF ID | Pd.00g778300.m01 | ||||||||
Organism | |||||||||
Taxonomic ID | |||||||||
Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Rosales; Rosaceae; Amygdaloideae; Amygdaleae; Prunus
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Family | AP2 | ||||||||
Protein Properties | Length: 403aa MW: 45434 Da PI: 6.8024 | ||||||||
Description | AP2 family protein | ||||||||
Gene Model |
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Signature Domain? help Back to Top | |||||||
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No. | Domain | Score | E-value | Start | End | HMM Start | HMM End |
1 | AP2 | 32.7 | 1.8e-10 | 70 | 126 | 1 | 55 |
AP2 1 sgykGVrwdkkrgrWvAeIrd.pseng..krkrfslgkfgtaeeAakaaiaarkkleg 55 s+++GV++++++ r++A+++d s+n k+k + g ++ +e Aa+a++ a++k++g Pd.00g778300.m01 70 SRFRGVSRHRWTCRFEAHLWDkLSWNVtqKKKGKQ-GAYDEEESAARAYDLAALKYWG 126 789******************88887784446666.9*******************98 PP | |||||||
2 | AP2 | 52.3 | 1.4e-16 | 169 | 220 | 1 | 55 |
AP2 1 sgykGVrwdkkrgrWvAeIrd.psengkrkrfslgkfgtaeeAakaaiaarkkleg 55 s+y+GV +++ +grW+A+I + g +k+ +lg++ t eeAa+a++ a+ +++g Pd.00g778300.m01 169 SKYRGVARHHHNGRWEARIGRvF---G-NKYLYLGTYSTQEEAARAYDIAAIEYRG 220 89****99**********99966...3.6*************************97 PP |
Sequence ? help Back to Top |
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Protein Sequence Length: 403 aa Download sequence |
MELMMVKNEE NPGRRRQSTA DRETEATRSV KRRRRDPPAV AVSCDNKQSE QQLPQKPADP 60 TSATTMKRSS RFRGVSRHRW TCRFEAHLWD KLSWNVTQKK KGKQGAYDEE ESAARAYDLA 120 ALKYWGTSTF TNFPISDYEK ETEIMQTVSK EEYLASLRRK SSGFSRGVSK YRGVARHHHN 180 GRWEARIGRV FGNKYLYLGT YSTQEEAARA YDIAAIEYRG INAVTNFDLS SYIRWLKTTA 240 DDPIATQEPE TVAEPQNKPF MANSYISTEE PFSHTNPFAS DYFTSPLKQE VIGSNIPLNT 300 DSKSSSPTAL GLLLQSSIFR ELVQKNSNFS EDESTDGGET KNQPQVGSDD EFGGIFYDGI 360 GNNPFDCSSN SDGDNNSWSS ITSTTLLNQP TKANASDSLF FFS |
Nucleic Localization Signal ? help Back to Top | |||
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No. | Start | End | Sequence |
1 | 14 | 35 | RRRQSTADRETEATRSVKRRRR |
Best hit in Arabidopsis thaliana ? help Back to Top | ||||||
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Hit ID | E-value | Description | ||||
AT3G54320.3 | 8e-90 | AP2 family protein |