PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
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Home TFext BLAST Prediction Download Help About Links PlantRegMap |
Transcription Factor Information
Basic Information? help Back to Top | |||||||||
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TF ID | Pd.00g773480.m01 | ||||||||
Organism | |||||||||
Taxonomic ID | |||||||||
Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Rosales; Rosaceae; Amygdaloideae; Amygdaleae; Prunus
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Family | MIKC_MADS | ||||||||
Protein Properties | Length: 152aa MW: 17783.2 Da PI: 9.4142 | ||||||||
Description | MIKC_MADS family protein | ||||||||
Gene Model |
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Signature Domain? help Back to Top | |||||||
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No. | Domain | Score | E-value | Start | End | HMM Start | HMM End |
1 | SRF-TF | 61.2 | 1.2e-19 | 9 | 42 | 1 | 34 |
S---SHHHHHHHHHHHHHHHHHHHHHHHHHHT-E CS SRF-TF 1 krienksnrqvtfskRrngilKKAeELSvLCdae 34 krien+snrqvt+skRrngi+KKA+E+ vLCda+ Pd.00g773480.m01 9 KRIENSSNRQVTYSKRRNGIIKKAKEITVLCDAK 42 79******************************96 PP | |||||||
2 | K-box | 47.3 | 8.6e-17 | 40 | 120 | 13 | 94 |
K-box 13 kaeslqqelakLkkeienLqreqRhllGedLesLslkeLqqLeqqLekslkkiRskKnel..lleqieelqkkekelqeenkaL 94 +a++l++e++++kk ++++q e+Rhl+ ed++sL++keL+ Le++Le++l + R+ +e+ l+ ++++ +e +++e+ ++L Pd.00g773480.m01 40 DAKNLSNEVDRVKKDNDSMQVELRHLKAEDITSLTHKELMALENALENGLASGRALEEEHkrLTYELHK---QEMKIEENVREL 120 4589***********************************************999876665114444444...444444444444 PP |
Sequence ? help Back to Top |
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Protein Sequence Length: 152 aa Download sequence |
MGRGKIEIKR IENSSNRQVT YSKRRNGIIK KAKEITVLCD AKNLSNEVDR VKKDNDSMQV 60 ELRHLKAEDI TSLTHKELMA LENALENGLA SGRALEEEHK RLTYELHKQE MKIEENVREL 120 ENGYHQRLGN YNNQIPFAFR VQPIQPNLQE RM |
Best hit in Arabidopsis thaliana ? help Back to Top | ||||||
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Hit ID | E-value | Description | ||||
AT5G20240.1 | 6e-51 | MIKC_MADS family protein |