PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
Home  TFext  BLAST  Prediction  Download  Help  About  Links  PlantRegMap
(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID Pd.00g734020.m01
Organism
Prunus domestica
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Rosales; Rosaceae; Amygdaloideae; Amygdaleae; Prunus
Family ERF
Protein Properties Length: 277aa    MW: 30576.9 Da    PI: 6.5125
Description ERF family protein
Gene Model
Gene Model ID Type Source Coding Sequence
Pd.00g734020.m01genomeGDRView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1AP265.21.3e-20122171255
               AP2   2 gykGVrwdkkrgrWvAeIrdpsengkr.krfslgkfgtaeeAakaaiaarkkleg 55 
                       +y+GVr+++ +g+W+AeIrdp    +r  r++lg+f taeeAa+a+++a+ +++g
  Pd.00g734020.m01 122 KYRGVRRRP-WGKWAAEIRDP----QRaVRVWLGTFETAEEAARAYDKAAIEFRG 171
                       8********.**********9....258***********************9997 PP
Sequence ? help Back to Top
Protein Sequence    Length: 277 aa     Download sequence    
MLSHANRIQQ EQEHCIIVSA LKHVISGSII AGGSGPTSQQ QQLMGAVHSA TSSVPSTRDR  60
TQSATDQVHM LSFSAEGDTC RVCGIEGCLG CDYFPSTTLP DRNKQLNLGS GANAGTRKGK  120
NKYRGVRRRP WGKWAAEIRD PQRAVRVWLG TFETAEEAAR AYDKAAIEFR GDKAKLNFSL  180
TSSDEHNNIT NSNTTSSSRT RTSSQLIRSM EEADQDKVNP ITVKQSEKIE IYESSAPQEE  240
NDQFLWDMLQ DGDDDDELKA WMSANSITSC SALMKPR
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT4G34410.11e-27ERF family protein